RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 RNF169Q8NCN4 708 aa17.29■□□□□ 0.36
CTSB-225ENST00000532409 ASAP3Q8TDY4 903 aa17.29■□□□□ 0.36
CTSB-225ENST00000532409 GPRC5CQ9NQ84 441 aa17.29■□□□□ 0.36
CTSB-225ENST00000532409 RNF19AQ9NV58 838 aa17.29■□□□□ 0.36
CTSB-225ENST00000532409 PPME1Q9Y570 386 aa17.29■□□□□ 0.36
CTSB-225ENST00000532409 H3BNC9 293 aa17.28■□□□□ 0.36
CTSB-225ENST00000532409 GRM6O15303 877 aa17.28■□□□□ 0.36
CTSB-225ENST00000532409 USO1O60763 962 aaKnown RBP17.28■□□□□ 0.36
CTSB-225ENST00000532409 ZSCAN20P17040 1043 aaPredicted RBP17.28■□□□□ 0.36
CTSB-225ENST00000532409 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
CTSB-225ENST00000532409 CDC25AP30304 524 aa17.28■□□□□ 0.36
CTSB-225ENST00000532409 BMPR1AP36894 532 aa17.28■□□□□ 0.36
CTSB-225ENST00000532409 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
CTSB-225ENST00000532409 SKIV2LQ15477 1246 aaKnown RBP17.28■□□□□ 0.36
CTSB-225ENST00000532409 RNF149Q8NC42 400 aa17.28■□□□□ 0.36
CTSB-225ENST00000532409 CLP1Q92989 425 aaKnown RBP17.28■□□□□ 0.36
CTSB-225ENST00000532409 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
CTSB-225ENST00000532409 SAMD11Q96NU1 681 aa17.28■□□□□ 0.36
CTSB-225ENST00000532409 POLR3CQ9BUI4 534 aaPredicted RBP17.28■□□□□ 0.36
CTSB-225ENST00000532409 ATP6V0A4Q9HBG4 840 aa17.28■□□□□ 0.36
CTSB-225ENST00000532409 TUFT1Q9NNX1 390 aa17.28■□□□□ 0.36
CTSB-225ENST00000532409 TMEM161AQ9NX61 479 aa17.28■□□□□ 0.36
CTSB-225ENST00000532409 PIN4Q9Y237 131 aaKnown RBP17.28■□□□□ 0.36
CTSB-225ENST00000532409 ATG2AQ2TAZ0 1938 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 SFPQP23246 707 aaKnown RBP eCLIP17.27■□□□□ 0.36
CTSB-225ENST00000532409 RPA1P27694 616 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 CCT6AP40227 531 aaKnown RBP17.27■□□□□ 0.36
CTSB-225ENST00000532409 CDC42EP1Q00587 391 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 LONRF3Q496Y0 759 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 CATSPER4Q7RTX7 472 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 ECHDC2Q86YB7 292 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 ERMNQ8TAM6 284 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 TCP11Q8WWU5 503 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 LRWD1Q9UFC0 647 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 CUL9Q8IWT3 2517 aa17.27■□□□□ 0.36
CTSB-225ENST00000532409 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
CTSB-225ENST00000532409 MEIS3P2A8K0S8 358 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 DGAT1O75907 488 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 GLRA2P23416 452 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 ARL2P36404 184 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 TFF2Q03403 129 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 CAPSQ13938 189 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 RILPL1Q5EBL4 403 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 CLLU1OSQ5K130 101 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 ZNF598Q86UK7 904 aaKnown RBP17.26■□□□□ 0.35
CTSB-225ENST00000532409 EXOC8Q8IYI6 725 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 IGSF22Q8N9C0 903 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 NACC1Q96RE7 527 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 POLR3FQ9H1D9 316 aaPredicted RBP17.26■□□□□ 0.35
CTSB-225ENST00000532409 POLD4Q9HCU8 107 aa17.26■□□□□ 0.35
CTSB-225ENST00000532409 ALG13Q9NP73 1137 aaKnown RBP17.26■□□□□ 0.35
CTSB-225ENST00000532409 A0A0U1RQF3 1178 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 C5orf67F2Z3F1 127 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 GAS2O43903 313 aaKnown RBP17.25■□□□□ 0.35
CTSB-225ENST00000532409 XRCC6P12956 609 aaKnown RBP eCLIP17.25■□□□□ 0.35
CTSB-225ENST00000532409 ATP2C1P98194 919 aaPredicted RBP17.25■□□□□ 0.35
CTSB-225ENST00000532409 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
CTSB-225ENST00000532409 PADI6Q6TGC4 694 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 LRRC55Q6ZSA7 311 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 SNX29Q8TEQ0 813 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 LPPQ93052 612 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 CASD1Q96PB1 797 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 MMTAG2Q9BU76 263 aaKnown RBP17.25■□□□□ 0.35
CTSB-225ENST00000532409 ELAC1Q9H777 363 aaKnown RBP17.25■□□□□ 0.35
CTSB-225ENST00000532409 AGPAT5Q9NUQ2 364 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 TYW1Q9NV66 732 aaKnown RBP17.25■□□□□ 0.35
CTSB-225ENST00000532409 THEGQ9P2T0 379 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 DBR1Q9UK59 544 aaKnown RBP17.25■□□□□ 0.35
CTSB-225ENST00000532409 KIAA1024Q9UPX6 916 aa17.25■□□□□ 0.35
CTSB-225ENST00000532409 K7ELQ4 463 aaPredicted RBP17.24■□□□□ 0.35
CTSB-225ENST00000532409 DNAJB1P25685 340 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 HOXA11P31270 313 aaPredicted RBP17.24■□□□□ 0.35
CTSB-225ENST00000532409 PBX3P40426 434 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 PHKA2P46019 1235 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 PTENP60484 403 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 HAUS3Q68CZ6 603 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 DTHD1Q6ZMT9 781 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 KLHL23Q8NBE8 558 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 HELQQ8TDG4 1101 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 BSNDQ8WZ55 320 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 MRPL38Q96DV4 380 aaKnown RBP17.24■□□□□ 0.35
CTSB-225ENST00000532409 C11orf84Q9BUA3 381 aaPredicted RBP17.24■□□□□ 0.35
CTSB-225ENST00000532409 INO80BQ9C086 356 aaPredicted RBP17.24■□□□□ 0.35
CTSB-225ENST00000532409 DDX19AQ9NUU7 478 aaKnown RBP17.24■□□□□ 0.35
CTSB-225ENST00000532409 LMCD1Q9NZU5 365 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 PLAGL2Q9UPG8 496 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 TTC28Q96AY4 2481 aa17.24■□□□□ 0.35
CTSB-225ENST00000532409 ARHGEF35A5YM69 484 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 LAD1O00515 517 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 ASAP2O43150 1006 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 ITGB1P05556 798 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 RB1P06400 928 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 PRPHP41219 470 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 CAMK1Q14012 370 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 PDIA5Q14554 519 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 MXD4Q14582 209 aaPredicted RBP17.23■□□□□ 0.35
CTSB-225ENST00000532409 ZRSR1Q15695 479 aaKnown RBP17.23■□□□□ 0.35
CTSB-225ENST00000532409 UBXN11Q5T124 520 aa17.23■□□□□ 0.35
CTSB-225ENST00000532409 SPOUT1Q5T280 376 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms