RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PTENP60484 403 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 CEBPZQ03701 1054 aaKnown RBP15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 GRIN2CQ14957 1233 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 ZNF697Q5TEC3 545 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 FOXD4L5Q5VV16 416 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 FAM117BQ6P1L5 589 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 LINC00301Q8NCQ3 95 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 NLRP7Q8WX94 980 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 FOXD4L4Q8WXT5 416 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 ZNF689Q96CS4 500 aaPredicted RBP15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 NLRP4Q96MN2 994 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 CLIC6Q96NY7 704 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 ADAM2Q99965 735 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 CCSER1Q9C0I3 900 aa15.5■□□□□ 0.07
TSPAN4-220ENST00000532375 SLC26A4O43511 780 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 UPP2O95045 317 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 LINC00271P0C7V0 271 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 SRGAP2CP0DJJ0 459 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 HOXA11P31270 313 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 CAPSQ13938 189 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 MXD4Q14582 209 aaPredicted RBP15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 ODR4Q5SWX8 454 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 C1orf186Q6ZWK4 172 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 SRGAP1Q7Z6B7 1085 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 CABP7Q86V35 215 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 DAW1Q8N136 415 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 KCTD17Q8N5Z5 321 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 RNF149Q8NC42 400 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 BSNDQ8WZ55 320 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 EPSTI1Q96J88 318 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 FAM161BQ96MY7 647 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 CSRNP2Q9H175 543 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 POLD4Q9HCU8 107 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 BLOC1S4Q9NUP1 217 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 DNM3Q9UQ16 869 aa15.49■□□□□ 0.07
TSPAN4-220ENST00000532375 FNDC1Q4ZHG4 1894 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 LINC01553A4QN01 128 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 ARHGEF35A5YM69 484 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 DGKIO75912 1065 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 DDIT3P35638 169 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 SARSP49591 514 aaKnown RBP15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 SLC12A3P55017 1021 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 MAPK7Q13164 816 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 SPECC1Q5M775 1068 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 RINT1Q6NUQ1 792 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 SLC24A5Q71RS6 500 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 MAEAQ7L5Y9 396 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 SYT2Q8N9I0 419 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 MCPH1Q8NEM0 835 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 PLIN2Q99541 437 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 ZBED2Q9BTP6 218 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 RUSC1Q9BVN2 902 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 TRAIPQ9BWF2 469 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 NFKBIZQ9BYH8 718 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 POLR3FQ9H1D9 316 aaPredicted RBP15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 SLC28A3Q9HAS3 691 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 RNF19AQ9NV58 838 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 INSL6Q9Y581 213 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 TCHHQ07283 1943 aa15.48■□□□□ 0.07
TSPAN4-220ENST00000532375 EPOPA6NHQ4 379 aa15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 UBA7P41226 1012 aa15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 KARSQ15046 597 aaKnown RBP15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 AMHR2Q16671 573 aa15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 ARSHQ5FYA8 562 aa15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 ZNF598Q86UK7 904 aaKnown RBP15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 NPAS4Q8IUM7 802 aa15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 CDX2Q99626 313 aaPredicted RBP15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 INO80BQ9C086 356 aaPredicted RBP15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 CHST12Q9NRB3 414 aa15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 C1orf112Q9NSG2 853 aa15.47■□□□□ 0.07
TSPAN4-220ENST00000532375 PPP6R2O75170 966 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 YEATS4O95619 227 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 ATF7P17544 494 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 GATMP50440 423 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 MBTD1Q05BQ5 628 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 ZRSR1Q15695 479 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 NAALADL2Q58DX5 795 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 AXDND1Q5T1B0 1012 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 FAM102BQ5T8I3 360 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 PPP2R2DQ66LE6 453 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 CDCA2Q69YH5 1023 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 CHAMP1Q96JM3 812 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 CCDC43Q96MW1 224 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 ZNF396Q96N95 335 aaPredicted RBP15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 SCLT1Q96NL6 688 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 NT5C3AQ9H0P0 336 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 ELAC1Q9H777 363 aaKnown RBP15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 AGPAT5Q9NUQ2 364 aa15.46■□□□□ 0.07
TSPAN4-220ENST00000532375 TRANK1O15050 2925 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 A0A0U1RQF3 1178 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 DENND3A2RUS2 1198 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 SPTLC2O15270 562 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 PLA2G4BP0C869 781 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 PLCG1P19174 1290 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 SFPQP23246 707 aaKnown RBP eCLIP15.45■□□□□ 0.062e-6■■■■□ 23.9
TSPAN4-220ENST00000532375 GUCY2CP25092 1073 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 PHKA2P46019 1235 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 ERVK-21P61565 698 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 TFDP1Q14186 410 aa15.45■□□□□ 0.06
TSPAN4-220ENST00000532375 ADGRE1Q14246 886 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms