RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 SP100P23497 879 aaPredicted RBP21.47■■□□□ 1.03
UBXN1-212ENST00000531625 MTHFRP42898 656 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 ALDH7A1P49419 539 aaKnown RBP21.47■■□□□ 1.03
UBXN1-212ENST00000531625 FGD1P98174 961 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 CDC42EP1Q00587 391 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 PRKCEQ02156 737 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 BMS1Q14692 1282 aaKnown RBP21.47■■□□□ 1.03
UBXN1-212ENST00000531625 HELQQ8TDG4 1101 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 RIT2Q99578 217 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 TM6SF1Q9BZW5 370 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 POMKQ9H5K3 350 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 CHST12Q9NRB3 414 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 FAM86C1Q9NVL1 165 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 NAP1L2Q9ULW6 460 aaPredicted RBP21.47■■□□□ 1.03
UBXN1-212ENST00000531625 CYP46A1Q9Y6A2 500 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 NID2Q14112 1375 aa21.47■■□□□ 1.03
UBXN1-212ENST00000531625 VPS13AQ96RL7 3174 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 CARNS1A5YM72 827 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 C2CD4DB7Z1M9 353 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 GFRA3O60609 400 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 PDGFBP01127 241 aaPredicted RBP21.46■■□□□ 1.03
UBXN1-212ENST00000531625 BCAR1P56945 870 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 TBC1D8BQ0IIM8 1120 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 MTMR3Q13615 1198 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 ATOH1Q92858 354 aaPredicted RBP21.46■■□□□ 1.03
UBXN1-212ENST00000531625 ZNF668Q96K58 619 aaPredicted RBP21.46■■□□□ 1.03
UBXN1-212ENST00000531625 TRAIPQ9BWF2 469 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 ZSWIM6Q9HCJ5 1215 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 TSHZ2Q9NRE2 1034 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 CDH22Q9UJ99 828 aa21.46■■□□□ 1.03
UBXN1-212ENST00000531625 MSH4O15457 936 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 EDIL3O43854 480 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 CXCL14O95715 111 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 SFNP31947 248 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 JAK3P52333 1124 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 TARBP2Q15633 366 aaKnown RBP21.45■■□□□ 1.02
UBXN1-212ENST00000531625 RUFY3Q7L099 469 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 NLRP7Q8WX94 980 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 TMEM169Q96HH4 297 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 SCLT1Q96NL6 688 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 DZANK1Q9NVP4 752 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 IRAK3Q9Y616 596 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 DMDP11532 3685 aa21.45■■□□□ 1.02
UBXN1-212ENST00000531625 GALR2O43603 387 aaPredicted RBP21.44■■□□□ 1.02
UBXN1-212ENST00000531625 BRD1O95696 1058 aa21.44■■□□□ 1.02
UBXN1-212ENST00000531625 FGFR4P22455 802 aa21.44■■□□□ 1.02
UBXN1-212ENST00000531625 USP11P51784 963 aa21.44■■□□□ 1.02
UBXN1-212ENST00000531625 POLGP54098 1239 aaPredicted RBP21.44■■□□□ 1.02
UBXN1-212ENST00000531625 UGCGQ16739 394 aa21.44■■□□□ 1.02
UBXN1-212ENST00000531625 CCDC148Q8NFR7 591 aa21.44■■□□□ 1.02
UBXN1-212ENST00000531625 SLC5A5Q92911 643 aa21.44■■□□□ 1.02
UBXN1-212ENST00000531625 SNX27Q96L92 541 aa21.44■■□□□ 1.02
UBXN1-212ENST00000531625 GCOM2Q9BZD3 368 aaPredicted RBP21.44■■□□□ 1.02
UBXN1-212ENST00000531625 ZBP1Q9H171 429 aa21.44■■□□□ 1.02
UBXN1-212ENST00000531625 NT5C1B-RDH14C9J2C7 533 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 PROB1E7EW31 1015 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 GAS7O60861 476 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 PHKA2P46019 1235 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 RBM25P49756 843 aaKnown RBP21.43■■□□□ 1.02
UBXN1-212ENST00000531625 AKAP17AQ02040 695 aaKnown RBP21.43■■□□□ 1.02
UBXN1-212ENST00000531625 GIT2Q14161 759 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 KIAA1841Q6NSI8 718 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 Q6ZUG5 572 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 ZDHHC14Q8IZN3 488 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 VPS52Q8N1B4 723 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 FBXL16Q8N461 479 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 RDM1Q8NG50 284 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 NIFKQ9BYG3 293 aaKnown RBP21.43■■□□□ 1.02
UBXN1-212ENST00000531625 USTQ9Y2C2 406 aa21.43■■□□□ 1.02
UBXN1-212ENST00000531625 IGKV6-21A0A0C4DH24 114 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 H0Y858 1186 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 CSDE1O75534 798 aaKnown RBP21.42■■□□□ 1.02
UBXN1-212ENST00000531625 SKIP12755 728 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 DRP2Q13474 957 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 NTRK3Q16288 839 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 ATAT1Q5SQI0 421 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 LRCH2Q5VUJ6 765 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 WDR87Q6ZQQ6 2873 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 DDX53Q86TM3 631 aaKnown RBP21.42■■□□□ 1.02
UBXN1-212ENST00000531625 BRF1Q92994 677 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 PHKBQ93100 1093 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 CEP89Q96ST8 783 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 TEKT3Q9BXF9 490 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 RNF26Q9BY78 433 aaPredicted RBP21.42■■□□□ 1.02
UBXN1-212ENST00000531625 UNC45AQ9H3U1 944 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 PDRG1Q9NUG6 133 aa21.42■■□□□ 1.02
UBXN1-212ENST00000531625 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.41■■□□□ 1.02
UBXN1-212ENST00000531625 CHMP2AO43633 222 aa21.41■■□□□ 1.02
UBXN1-212ENST00000531625 ZC3H11AO75152 810 aaKnown RBP eCLIP21.41■■□□□ 1.02
UBXN1-212ENST00000531625 CTSAP10619 480 aa21.41■■□□□ 1.02
UBXN1-212ENST00000531625 SFPQP23246 707 aaKnown RBP eCLIP21.41■■□□□ 1.02
UBXN1-212ENST00000531625 XKR3Q5GH77 459 aa21.41■■□□□ 1.02
UBXN1-212ENST00000531625 RARS2Q5T160 578 aaKnown RBP21.41■■□□□ 1.02
UBXN1-212ENST00000531625 TMEM173Q86WV6 379 aaPredicted RBP21.41■■□□□ 1.02
UBXN1-212ENST00000531625 PLCD3Q8N3E9 789 aa21.41■■□□□ 1.02
UBXN1-212ENST00000531625 TDRD5Q8NAT2 981 aaKnown RBP21.41■■□□□ 1.02
UBXN1-212ENST00000531625 IGSF21Q96ID5 467 aa21.41■■□□□ 1.02
UBXN1-212ENST00000531625 TBC1D32Q96NH3 1257 aa21.41■■□□□ 1.02
UBXN1-212ENST00000531625 INO80BQ9C086 356 aaPredicted RBP21.41■■□□□ 1.02
UBXN1-212ENST00000531625 GVINP1Q7Z2Y8 2422 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms