RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 SNAP25P60880 206 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 ITGB3BPQ13352 177 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-229ENST00000531014 DOK7Q18PE1 504 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 RGMBQ6NW40 437 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 PPP4R3CPQ6ZMV5 832 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 TADA1Q96BN2 335 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 LRRC39Q96DD0 335 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 CAPNS2Q96L46 248 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 MED10Q9BTT4 135 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 RPAP3Q9H6T3 665 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-229ENST00000531014 MRPL44Q9H9J2 332 aaKnown RBP7.72□□□□□ -1.17
CTNND1-229ENST00000531014 CREBZFQ9NS37 354 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 EPN1Q9Y6I3 576 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-229ENST00000531014 STON1Q9Y6Q2 735 aa7.72□□□□□ -1.17
CTNND1-229ENST00000531014 SYNDIG1LA6NDD5 238 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 GOLGA8JA6NMD2 632 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 TBKBP1A7MCY6 615 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 GOLGA8TH3BQL2 631 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 CLASP2O75122 1294 aaKnown RBP7.71□□□□□ -1.17
CTNND1-229ENST00000531014 MOCS3O95396 460 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 IL15P40933 162 aaPredicted RBP7.71□□□□□ -1.17
CTNND1-229ENST00000531014 KRT76Q01546 638 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 KRT72Q14CN4 511 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 FAM178BQ8IXR5 827 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 ETNK1Q9HBU6 452 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 TUFT1Q9NNX1 390 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 RTEL1Q9NZ71 1219 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 ATP10DQ9P241 1426 aa7.71□□□□□ -1.17
CTNND1-229ENST00000531014 KCNJ18B7U540 433 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 MYO1FO00160 1098 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 TRIM13O60858 407 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 GUCA1CO95843 209 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 SOX5P35711 763 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 PPARGP37231 505 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-229ENST00000531014 MECOMQ03112 1051 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 LAMB3Q13751 1172 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 KCNJ12Q14500 433 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 INPP5AQ14642 412 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 SGO2Q562F6 1265 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 BEND6Q5SZJ8 279 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-229ENST00000531014 ARMC3Q5W041 872 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 FAM45BPQ6NSW5 357 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 TMEM154Q6P9G4 183 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 NANOGNBQ7Z5D8 188 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 PBXIP1Q96AQ6 731 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 C1orf112Q9NSG2 853 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 USE1Q9NZ43 259 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 PKD2L1Q9P0L9 805 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 TBC1D4O60343 1298 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 ECE2O60344 883 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 FAM107AO95990 144 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 PLS3P13797 630 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 ITGAXP20702 1163 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 TXKP42681 527 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 NR1H3Q13133 447 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 KCTD2Q14681 263 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 CASP8Q14790 479 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 MAPRE2Q15555 327 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 TRIP4Q15650 581 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-229ENST00000531014 HABP4Q5JVS0 413 aaKnown RBP7.71□□□□□ -1.18
CTNND1-229ENST00000531014 TTC38Q5R3I4 469 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 SLC9C2Q5TAH2 1124 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 CREB3L3Q68CJ9 461 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 LINS1Q8NG48 757 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 DEPDC1BQ8WUY9 529 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 NARS2Q96I59 477 aaKnown RBP7.71□□□□□ -1.18
CTNND1-229ENST00000531014 TESK2Q96S53 571 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 ZMYND12Q9H0C1 365 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 UBXN8O00124 270 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 COPEO14579 308 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 RALBP11234 206 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 CCT3P49368 545 aaKnown RBP7.71□□□□□ -1.18
CTNND1-229ENST00000531014 NUP107P57740 925 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 NEK8Q86SG6 692 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 ZBTB33Q86T24 672 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 LRRC8AQ8IWT6 810 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 ANKRD13AQ8IZ07 590 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 STAG2Q8N3U4 1231 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 ATP8B4Q8TF62 1192 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 OTULINQ96BN8 352 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 TRIM11Q96F44 468 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 LLPHQ9BRT6 129 aaKnown RBP7.71□□□□□ -1.18
CTNND1-229ENST00000531014 ECT2Q9H8V3 914 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 ABCF3Q9NUQ8 709 aa7.71□□□□□ -1.18
CTNND1-229ENST00000531014 MAGEB6P1A0A0J9YX57 407 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 ZNF839A8K0R7 811 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 ANKRD65E5RJM6 399 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 CCNT1O60563 726 aaKnown RBP7.7□□□□□ -1.18
CTNND1-229ENST00000531014 TPP2P29144 1249 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-229ENST00000531014 IL12RB1P42701 662 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 PTPROQ16827 1216 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 ARMCX4Q5H9R4 360 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 EMBQ6PCB8 327 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 OLFML1Q6UWY5 402 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 CTU1Q7Z7A3 348 aaKnown RBP7.7□□□□□ -1.18
CTNND1-229ENST00000531014 STX12Q86Y82 276 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 BBS7Q8IWZ6 715 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 SIX5Q8N196 739 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 CHMP2BQ9UQN3 213 aa7.7□□□□□ -1.18
CTNND1-229ENST00000531014 NEXMIFQ5QGS0 1516 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms