RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PLEKHH3Q7Z736 793 aa9.79□□□□□ -0.84
CSDE1-213ENST00000530784 KIAA0907Q7Z7F0 614 aaPredicted RBP9.79□□□□□ -0.84
CSDE1-213ENST00000530784 FOXRED1Q96CU9 486 aaPredicted RBP9.79□□□□□ -0.84
CSDE1-213ENST00000530784 PTPN22Q9Y2R2 807 aa9.79□□□□□ -0.84
CSDE1-213ENST00000530784 ANKRD50Q9ULJ7 1429 aa9.79□□□□□ -0.84
CSDE1-213ENST00000530784 ZNF536O15090 1300 aa9.79□□□□□ -0.84
CSDE1-213ENST00000530784 RPRD2Q5VT52 1461 aaKnown RBP9.79□□□□□ -0.84
CSDE1-213ENST00000530784 ENPP3O14638 875 aa9.78□□□□□ -0.84
CSDE1-213ENST00000530784 CD83Q01151 205 aa9.78□□□□□ -0.84
CSDE1-213ENST00000530784 CXXC5Q7LFL8 322 aaKnown RBP9.78□□□□□ -0.84
CSDE1-213ENST00000530784 RALYLQ86SE5 291 aaKnown RBP9.78□□□□□ -0.84
CSDE1-213ENST00000530784 REXO1L1PQ8IX06 675 aa9.78□□□□□ -0.84
CSDE1-213ENST00000530784 WDR48Q8TAF3 677 aa9.78□□□□□ -0.84
CSDE1-213ENST00000530784 RBM15Q96T37 977 aaKnown RBP eCLIP9.78□□□□□ -0.84
CSDE1-213ENST00000530784 OR10A5Q9H207 317 aa9.78□□□□□ -0.84
CSDE1-213ENST00000530784 CFAP65Q6ZU64 1925 aaKnown RBP9.78□□□□□ -0.84
CSDE1-213ENST00000530784 TMEM94Q12767 1356 aa9.77□□□□□ -0.84
CSDE1-213ENST00000530784 H7C1D1 291 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 LAMTOR5O43504 91 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 ITGB3P05106 788 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 ZNF888P0CJ79 500 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-213ENST00000530784 POU3F2P20265 443 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-213ENST00000530784 PPP2CBP62714 309 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 PPP2CAP67775 309 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 SURF1Q15526 300 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 KANK2Q63ZY3 851 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 GIMAP6Q6P9H5 292 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 RTN4RL1Q86UN2 441 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-213ENST00000530784 KIAA1958Q8N8K9 716 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 ORAI3Q9BRQ5 295 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 PCIF1Q9H4Z3 704 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 ACSS2Q9NR19 701 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 SLC52A1Q9NWF4 448 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 PLAAQ9Y263 795 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 NKTRP30414 1462 aaKnown RBP9.77□□□□□ -0.85
CSDE1-213ENST00000530784 TET3O43151 1660 aa9.77□□□□□ -0.85
CSDE1-213ENST00000530784 NWD1Q149M9 1564 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 CUTAO60888 179 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 SLC9A1P19634 815 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 USP10Q14694 798 aaKnown RBP9.76□□□□□ -0.85
CSDE1-213ENST00000530784 PCBP1Q15365 356 aaKnown RBP eCLIP9.76□□□□□ -0.85
CSDE1-213ENST00000530784 ZNF174Q15697 407 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 CREB3L3Q68CJ9 461 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 ARHGEF18Q6ZSZ5 1173 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 NXPE1Q8N323 547 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 CARD11Q9BXL7 1154 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 ZDHHC5Q9C0B5 715 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 CDC42EP3Q9UKI2 254 aa9.76□□□□□ -0.85
CSDE1-213ENST00000530784 XIRP1Q702N8 1843 aaKnown RBP9.76□□□□□ -0.85
CSDE1-213ENST00000530784 FAM135BQ49AJ0 1406 aa9.75□□□□□ -0.85
CSDE1-213ENST00000530784 TLDC2A0PJX2 215 aa9.75□□□□□ -0.85
CSDE1-213ENST00000530784 PTX3P26022 381 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-213ENST00000530784 BUD31P41223 144 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-213ENST00000530784 FNTBP49356 437 aa9.75□□□□□ -0.85
CSDE1-213ENST00000530784 LIMS2Q7Z4I7 341 aa9.75□□□□□ -0.85
CSDE1-213ENST00000530784 MFSD3Q96ES6 412 aa9.75□□□□□ -0.85
CSDE1-213ENST00000530784 PTPN18Q99952 460 aa9.75□□□□□ -0.85
CSDE1-213ENST00000530784 TARS2Q9BW92 718 aaKnown RBP9.75□□□□□ -0.85
CSDE1-213ENST00000530784 OXSMQ9NWU1 459 aa9.75□□□□□ -0.85
CSDE1-213ENST00000530784 PPP4R1LQ9P1A2 415 aa9.75□□□□□ -0.85
CSDE1-213ENST00000530784 UNC13BO14795 1591 aa9.75□□□□□ -0.85
CSDE1-213ENST00000530784 ZFYVE9O95405 1425 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 ZNF891A8MT65 544 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-213ENST00000530784 K7ESM1 405 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 ATP2A2P16615 1042 aaKnown RBP9.74□□□□□ -0.85
CSDE1-213ENST00000530784 ETV4P43268 484 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 KCNQ1P51787 676 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 EPHB4P54760 987 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 ALDH6A1Q02252 535 aaKnown RBP9.74□□□□□ -0.85
CSDE1-213ENST00000530784 OTOP2Q7RTS6 562 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 KIF18BQ86Y91 864 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 CALML6Q8TD86 181 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 ELF4Q99607 663 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-213ENST00000530784 SSBP3Q9BWW4 388 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-213ENST00000530784 JADE2Q9NQC1 790 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 H2AFY2Q9P0M6 372 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-213ENST00000530784 FBXO10Q9UK96 956 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 ZKSCAN5Q9Y2L8 839 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 PLEKHG1Q9ULL1 1385 aa9.74□□□□□ -0.85
CSDE1-213ENST00000530784 F2P00734 622 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 CYP17A1P05093 508 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 MOGSQ13724 837 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 PLEKHG4Q58EX7 1191 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 FOXB1Q99853 325 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 IFT57Q9NWB7 429 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 SLC4A7Q9Y6M7 1214 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 GCC2Q8IWJ2 1684 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 MSH6P52701 1360 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 RIMS2Q9UQ26 1411 aa9.73□□□□□ -0.85
CSDE1-213ENST00000530784 ROBO1Q9Y6N7 1651 aa9.72□□□□□ -0.85
CSDE1-213ENST00000530784 CNOT4O95628 575 aaKnown RBP9.72□□□□□ -0.85
CSDE1-213ENST00000530784 HMGCRP04035 888 aa9.72□□□□□ -0.85
CSDE1-213ENST00000530784 APEX1P27695 318 aaKnown RBP9.72□□□□□ -0.85
CSDE1-213ENST00000530784 RRADP55042 308 aa9.72□□□□□ -0.85
CSDE1-213ENST00000530784 DSG1Q02413 1049 aa9.72□□□□□ -0.85
CSDE1-213ENST00000530784 EIF4HQ15056 248 aaKnown RBP9.72□□□□□ -0.85
CSDE1-213ENST00000530784 GLB1LQ6UWU2 654 aa9.72□□□□□ -0.85
CSDE1-213ENST00000530784 IFNL2Q8IZJ0 200 aa9.72□□□□□ -0.85
CSDE1-213ENST00000530784 C16orf92Q96LL3 132 aa9.72□□□□□ -0.85
CSDE1-213ENST00000530784 CNOT11Q9UKZ1 510 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms