RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CHST12Q9NRB3 414 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 RNF19AQ9NV58 838 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 PCDHGC5Q9Y5F6 944 aa23.44■■□□□ 1.34
SMPD1-204ENST00000530395 TBX3O15119 743 aa23.43■■□□□ 1.34
SMPD1-204ENST00000530395 DCXO43602 365 aa23.43■■□□□ 1.34
SMPD1-204ENST00000530395 PLCB3Q01970 1234 aa23.43■■□□□ 1.34
SMPD1-204ENST00000530395 ANO5Q75V66 913 aa23.43■■□□□ 1.34
SMPD1-204ENST00000530395 RHPN2Q8IUC4 686 aa23.43■■□□□ 1.34
SMPD1-204ENST00000530395 EXOC8Q8IYI6 725 aa23.43■■□□□ 1.34
SMPD1-204ENST00000530395 MRPS27Q92552 414 aaKnown RBP23.43■■□□□ 1.34
SMPD1-204ENST00000530395 CDCA3Q99618 268 aaPredicted RBP23.43■■□□□ 1.34
SMPD1-204ENST00000530395 MRPL9Q9BYD2 267 aaKnown RBP23.43■■□□□ 1.34
SMPD1-204ENST00000530395 A0A087WZ62 844 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 EML1O00423 815 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 EYA4O95677 639 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 P4HBP07237 508 aaKnown RBP23.42■■□□□ 1.34
SMPD1-204ENST00000530395 ERVFC1P60507 584 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 COASYQ13057 564 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 ERICH6BQ5W0A0 696 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 PLA2G4FQ68DD2 849 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 KCNT2Q6UVM3 1135 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 LRRC55Q6ZSA7 311 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 OXER1Q8TDS5 423 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 SLC7A3Q8WY07 619 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 RSPH1Q8WYR4 309 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 FDXACB1Q9BRP7 624 aaPredicted RBP23.42■■□□□ 1.34
SMPD1-204ENST00000530395 ENTPD7Q9NQZ7 604 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 CYP26B1Q9NR63 512 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 GJB4Q9NTQ9 266 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 CLEC1BQ9P126 229 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 PPME1Q9Y570 386 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 ARID2Q68CP9 1835 aa23.42■■□□□ 1.34
SMPD1-204ENST00000530395 FSCN2O14926 492 aa23.41■■□□□ 1.34
SMPD1-204ENST00000530395 CSDE1O75534 798 aaKnown RBP23.41■■□□□ 1.34
SMPD1-204ENST00000530395 CTDNEP1O95476 244 aa23.41■■□□□ 1.34
SMPD1-204ENST00000530395 SRGAP2BP0DMP2 458 aa23.41■■□□□ 1.34
SMPD1-204ENST00000530395 KRT2P35908 639 aa23.41■■□□□ 1.34
SMPD1-204ENST00000530395 KRT17Q04695 432 aa23.41■■□□□ 1.34
SMPD1-204ENST00000530395 CLLU1OSQ5K130 101 aa23.41■■□□□ 1.34
SMPD1-204ENST00000530395 TWF2Q6IBS0 349 aaKnown RBP23.41■■□□□ 1.34
SMPD1-204ENST00000530395 ZNF598Q86UK7 904 aaKnown RBP23.41■■□□□ 1.34
SMPD1-204ENST00000530395 SMRP1Q8NCR6 262 aa23.41■■□□□ 1.34
SMPD1-204ENST00000530395 HELQQ8TDG4 1101 aa23.41■■□□□ 1.34
SMPD1-204ENST00000530395 NLRP4Q96MN2 994 aa23.41■■□□□ 1.34
SMPD1-204ENST00000530395 BARX2Q9UMQ3 279 aaPredicted RBP23.41■■□□□ 1.34
SMPD1-204ENST00000530395 PRR33A8MZF0 331 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 PER2O15055 1255 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 BAG4O95429 457 aaKnown RBP23.4■■□□□ 1.34
SMPD1-204ENST00000530395 GLP2RO95838 553 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 SKIP12755 728 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 POLGP54098 1239 aaPredicted RBP23.4■■□□□ 1.34
SMPD1-204ENST00000530395 DUSP6Q16828 381 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 PLPP4Q5VZY2 271 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 POTEDQ86YR6 584 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 SLFN12Q8IYM2 578 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 GTF3C6Q969F1 213 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 FAM122AQ96E09 287 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 CEP170P1Q96L14 293 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 TCF25Q9BQ70 676 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 NGRNQ9NPE2 291 aaKnown RBP23.4■■□□□ 1.34
SMPD1-204ENST00000530395 SPG21Q9NZD8 308 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 PIN4Q9Y237 131 aaKnown RBP23.4■■□□□ 1.34
SMPD1-204ENST00000530395 TRIOO75962 3097 aa23.4■■□□□ 1.34
SMPD1-204ENST00000530395 RFC5P40937 340 aa23.39■■□□□ 1.33
SMPD1-204ENST00000530395 PHKA2P46019 1235 aa23.39■■□□□ 1.33
SMPD1-204ENST00000530395 EPHA7Q15375 998 aa23.39■■□□□ 1.33
SMPD1-204ENST00000530395 NCAPH2Q6IBW4 605 aa23.39■■□□□ 1.33
SMPD1-204ENST00000530395 CATSPER4Q7RTX7 472 aa23.39■■□□□ 1.33
SMPD1-204ENST00000530395 HAS1Q92839 578 aa23.39■■□□□ 1.33
SMPD1-204ENST00000530395 LXNQ9BS40 222 aa23.39■■□□□ 1.33
SMPD1-204ENST00000530395 TRAIPQ9BWF2 469 aa23.39■■□□□ 1.33
SMPD1-204ENST00000530395 COL4A3BPQ9Y5P4 624 aa23.39■■□□□ 1.33
SMPD1-204ENST00000530395 DTNBO60941 627 aa23.38■■□□□ 1.33
SMPD1-204ENST00000530395 ATF7P17544 494 aaPredicted RBP23.38■■□□□ 1.33
SMPD1-204ENST00000530395 PLA2G5P39877 138 aa23.38■■□□□ 1.33
SMPD1-204ENST00000530395 PBX3P40426 434 aa23.38■■□□□ 1.33
SMPD1-204ENST00000530395 RAB27AP51159 221 aa23.38■■□□□ 1.33
SMPD1-204ENST00000530395 NPEPPSP55786 919 aa23.38■■□□□ 1.33
SMPD1-204ENST00000530395 OTUD6AQ7L8S5 288 aa23.38■■□□□ 1.33
SMPD1-204ENST00000530395 KSR1Q8IVT5 923 aa23.38■■□□□ 1.33
SMPD1-204ENST00000530395 C4orf19Q8IY42 314 aa23.38■■□□□ 1.33
SMPD1-204ENST00000530395 NECAB1Q8N987 351 aa23.38■■□□□ 1.33
SMPD1-204ENST00000530395 ARIH1Q9Y4X5 557 aaPredicted RBP23.38■■□□□ 1.33
SMPD1-204ENST00000530395 CARNS1A5YM72 827 aa23.37■■□□□ 1.33
SMPD1-204ENST00000530395 GAS2O43903 313 aaKnown RBP23.37■■□□□ 1.33
SMPD1-204ENST00000530395 YWHABP31946 246 aaKnown RBP23.37■■□□□ 1.33
SMPD1-204ENST00000530395 NR5A1Q13285 461 aa23.37■■□□□ 1.33
SMPD1-204ENST00000530395 ME3Q16798 604 aa23.37■■□□□ 1.33
SMPD1-204ENST00000530395 TMC7Q7Z402 723 aa23.37■■□□□ 1.33
SMPD1-204ENST00000530395 PSPC1Q8WXF1 523 aaKnown RBP23.37■■□□□ 1.33
SMPD1-204ENST00000530395 DHX33Q9H6R0 707 aaKnown RBP23.37■■□□□ 1.33
SMPD1-204ENST00000530395 ZSWIM4Q9H7M6 989 aa23.37■■□□□ 1.33
SMPD1-204ENST00000530395 USP15Q9Y4E8 981 aaPredicted RBP23.37■■□□□ 1.33
SMPD1-204ENST00000530395 FDPSP14324 419 aaKnown RBP23.36■■□□□ 1.33
SMPD1-204ENST00000530395 ALDH7A1P49419 539 aaKnown RBP23.36■■□□□ 1.33
SMPD1-204ENST00000530395 TRIM29Q14134 588 aa23.36■■□□□ 1.33
SMPD1-204ENST00000530395 BMS1Q14692 1282 aaKnown RBP23.36■■□□□ 1.33
SMPD1-204ENST00000530395 EARS2Q5JPH6 523 aaKnown RBP23.36■■□□□ 1.33
SMPD1-204ENST00000530395 GLB1LQ6UWU2 654 aa23.36■■□□□ 1.33
SMPD1-204ENST00000530395 SLC39A11Q8N1S5 342 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms