RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 DCP1AQ9NPI6 582 aaPredicted RBP16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 STRIP2Q9ULQ0 834 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 CPDO75976 1380 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 PSMD14O00487 310 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 NCF2P19878 526 aaPredicted RBP16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 USP11P51784 963 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 TMPRSS15P98073 1019 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 SH2D3CQ8N5H7 860 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 PIP4K2CQ8TBX8 421 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 ABTB1Q969K4 478 aaPredicted RBP16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 TLK1Q9UKI8 766 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 AKT3Q9Y243 479 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 COL15A1P39059 1388 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 TYW5A2RUC4 315 aaKnown RBP16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 COPEO14579 308 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 SRGNP10124 158 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 TNFAIP2Q03169 654 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 ZNF211Q13398 564 aaPredicted RBP16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 KNOP1Q1ED39 458 aaKnown RBP16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 RCSD1Q6JBY9 416 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 LRIG3Q6UXM1 1119 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 XXYLT1Q8NBI6 393 aa16.5■□□□□ 0.23
PCDHA4-203ENST00000530339 CALB1P05937 261 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 IFRD2Q12894 506 aaPredicted RBP16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 PODNQ7Z5L7 613 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 ARMC2Q8NEN0 867 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 MLXIPLQ9NP71 852 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 PP2D1A8MPX8 630 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 MDM2Q00987 491 aaPredicted RBP16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 ART3Q13508 389 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 CTTNQ14247 550 aaKnown RBP16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 RC3H1Q5TC82 1133 aaKnown RBP16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 ENGASEQ8NFI3 743 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 SH3RF3Q8TEJ3 882 aaPredicted RBP16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 RFFLQ8WZ73 363 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 RPF1Q9H9Y2 349 aaKnown RBP16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 AMACRQ9UHK6 382 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 NUB1Q9Y5A7 615 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 GSG1L2A8MUP6 293 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 IRAK1P51617 712 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 ITKQ08881 620 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 ELOA2Q8IYF1 753 aaPredicted RBP16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 ADSSL1Q8N142 457 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 RIN2Q8WYP3 895 aaPredicted RBP16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 TTC1Q99614 292 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 SSU72P8A0A1W2PR75 194 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 PDHA1P08559 390 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 H2AFXP16104 143 aaPredicted RBP16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 CDR2Q01850 454 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 DPYDQ12882 1025 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 TFDP2Q14188 446 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 ANKRD40Q6AI12 368 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 KCNV2Q8TDN2 545 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 FAM167BQ9BTA0 163 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 ATP6V0A4Q9HBG4 840 aa16.49■□□□□ 0.23
PCDHA4-203ENST00000530339 E9PMD0 336 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 TBXAS1P24557 533 aaPredicted RBP16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 CRB1P82279 1406 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 CLRN2A0PK11 232 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 WDR64B1ANS9 1081 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 K7ERI5 159 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 TFAMQ00059 246 aaKnown RBP16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 PDIA5Q14554 519 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 KLHL38Q2WGJ6 581 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 CFAP36Q96G28 342 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 MSTO1Q9BUK6 570 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 TIPINQ9BVW5 301 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 SFI1A8K8P3 1242 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 CORO7P57737 925 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 HLFQ16534 295 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 CCDC137Q6PK04 289 aaKnown RBP16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 TRIM72Q6ZMU5 477 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 KCTD17Q8N5Z5 321 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 DNAAF3Q8N9W5 541 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 ADAM22Q9P0K1 906 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 ZNF609O15014 1411 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 SORBS3O60504 671 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 PLA2G4AP47712 749 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 FOXO4P98177 505 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 CIAPIN1Q6FI81 312 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 ERICH1Q86X53 443 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 TRIML2Q8N7C3 387 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 CCSER1Q9C0I3 900 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 DBNDD1Q9H9R9 158 aa16.48■□□□□ 0.23
PCDHA4-203ENST00000530339 KRT10P13645 584 aa16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 PDXDC2PQ6P474 469 aa16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 TMEM35BQ8NCS4 154 aa16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 XAB2Q9HCS7 855 aaKnown RBP16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 ZBED1O96006 694 aa16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 FCER1AP12319 257 aa16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 AP3M2P53677 418 aa16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 DYNC1I2Q13409 638 aaKnown RBP16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 DRAP1Q14919 205 aaPredicted RBP16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 LRRC14Q15048 493 aa16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 ARL13BQ3SXY8 428 aa16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 BATF3Q9NR55 127 aa16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.47■□□□□ 0.23
PCDHA4-203ENST00000530339 GOLGA8IPA6NC78 632 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms