RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 CDKN1CP49918 316 aaPredicted RBP8.6□□□□□ -1.03
SVIP-204ENST00000530199 NFIAQ12857 509 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 TNFAIP1Q13829 316 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 ZNF460Q14592 562 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 C9orf50Q5SZB4 431 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 ACBD5Q5T8D3 534 aaPredicted RBP8.6□□□□□ -1.03
SVIP-204ENST00000530199 CDKAL1Q5VV42 579 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 KCNT2Q6UVM3 1135 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 TSPYL5Q86VY4 417 aaPredicted RBP8.6□□□□□ -1.03
SVIP-204ENST00000530199 PPIL6Q8IXY8 311 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 AHI1Q8N157 1196 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 AFAP1L2Q8N4X5 818 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 FAM181AQ8N9Y4 354 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 TEPSINQ96N21 525 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 WDFY4Q6ZS81 3184 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 CFAP54Q96N23 3096 aa8.6□□□□□ -1.03
SVIP-204ENST00000530199 LTBP2Q14767 1821 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 TCRBV16S1A1N1A0A5B0 115 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 CLRN2A0PK11 232 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 SMIM22K7EJ46 135 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 AQP7O14520 342 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 OPA1O60313 960 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 RASGRP1O95267 797 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 HMGCRP04035 888 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 IGFALSP35858 605 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 EIF4A1P60842 406 aaKnown RBP8.59□□□□□ -1.03
SVIP-204ENST00000530199 PPATQ06203 517 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 TESK1Q15569 626 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 PLEKHG6Q3KR16 790 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 RCSD1Q6JBY9 416 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 MCM10Q7L590 875 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 DDX42Q86XP3 938 aaKnown RBP eCLIP8.59□□□□□ -1.03
SVIP-204ENST00000530199 SPACA3Q8IXA5 215 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 RTF1Q92541 710 aaKnown RBP8.59□□□□□ -1.03
SVIP-204ENST00000530199 PHACTR3Q96KR7 559 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 PRMT6Q96LA8 375 aaPredicted RBP8.59□□□□□ -1.03
SVIP-204ENST00000530199 PARK7Q99497 189 aaKnown RBP8.59□□□□□ -1.03
SVIP-204ENST00000530199 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 METTL22Q9BUU2 404 aaPredicted RBP8.59□□□□□ -1.03
SVIP-204ENST00000530199 PANK3Q9H999 370 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 VEZTQ9HBM0 779 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 NPFFR2Q9Y5X5 522 aa8.59□□□□□ -1.03
SVIP-204ENST00000530199 MAST2Q6P0Q8 1798 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 WASH4PA8MWX3 477 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 ARNTLO00327 626 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 TNPO2O14787 897 aaKnown RBP8.58□□□□□ -1.04
SVIP-204ENST00000530199 ZNF205O95201 554 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 CRTAMO95727 393 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 PDGFRBP09619 1106 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 U2AF1L5P0DN76 240 aaPredicted RBP8.58□□□□□ -1.04
SVIP-204ENST00000530199 SEPHS1P49903 392 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 U2AF1Q01081 240 aaKnown RBP eCLIP8.58□□□□□ -1.04
SVIP-204ENST00000530199 MOGSQ13724 837 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 RSPO2Q6UXX9 243 aaPredicted RBP8.58□□□□□ -1.04
SVIP-204ENST00000530199 PNISRQ8TF01 805 aaKnown RBP8.58□□□□□ -1.04
SVIP-204ENST00000530199 LEO1Q8WVC0 666 aaPredicted RBP8.58□□□□□ -1.04
SVIP-204ENST00000530199 FAM89AQ96GI7 184 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 ZFYVE21Q9BQ24 234 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 PHF20Q9BVI0 1012 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 IRF2BPLQ9H1B7 796 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 TPSG1Q9NRR2 321 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 KLHL42Q9P2K6 505 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 MCM8Q9UJA3 840 aa8.58□□□□□ -1.04
SVIP-204ENST00000530199 MEFVO15553 781 aaPredicted RBP8.57□□□□□ -1.04
SVIP-204ENST00000530199 NPTXRO95502 500 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 SYPP08247 313 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 PLS3P13797 630 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 TPP2P29144 1249 aaPredicted RBP8.57□□□□□ -1.04
SVIP-204ENST00000530199 NEK4P51957 841 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 PCBP3P57721 371 aaKnown RBP8.57□□□□□ -1.04
SVIP-204ENST00000530199 PCBP1Q15365 356 aaKnown RBP eCLIP8.57□□□□□ -1.04
SVIP-204ENST00000530199 AAK1Q2M2I8 961 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 GAB4Q2WGN9 574 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 CFAP100Q494V2 611 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 RTP2Q5QGT7 225 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 MAP3K21Q5TCX8 1036 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 EEF1DP3Q658K8 133 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 E4F1Q66K89 784 aaPredicted RBP8.57□□□□□ -1.04
SVIP-204ENST00000530199 THAP5Q7Z6K1 395 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 STRA8Q7Z7C7 330 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 CCDC103Q8IW40 242 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 HSPA12BQ96MM6 686 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 OSBPL1AQ9BXW6 950 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 HOMER2Q9NSB8 354 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 ZSWIM5Q9P217 1185 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 TMEFF2Q9UIK5 374 aaPredicted RBP8.57□□□□□ -1.04
SVIP-204ENST00000530199 PLAGL2Q9UPG8 496 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 PCDHA9Q9Y5H5 950 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 PCDHAC2Q9Y5I4 1007 aa8.57□□□□□ -1.04
SVIP-204ENST00000530199 AOX1Q06278 1338 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 TCF20Q9UGU0 1960 aaKnown RBP8.56□□□□□ -1.04
SVIP-204ENST00000530199 WDR64B1ANS9 1081 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 PI4K2BG5E9Z4 385 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 H3BS24 57 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 CEACAM5P06731 702 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 GSTM1P09488 218 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 JMJD7P0C870 316 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 NAT1P18440 290 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 FLT3P36888 993 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 CLCN7P51798 805 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms