RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 MORC2Q9Y6X9 1032 aaPredicted RBP14.09□□□□□ -0.15
CCDC90B-216ENST00000529856 CHD9Q3L8U1 2897 aa14.08□□□□□ -0.15
CCDC90B-216ENST00000529856 DENND3A2RUS2 1198 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 C9IYK1 514 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 E9PMD0 336 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 SLC26A4O43511 780 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 ARHGEF15O94989 841 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 SARSP49591 514 aaKnown RBP14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 FAM189BP81408 668 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 TAP1Q03518 808 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 CEBPZQ03701 1054 aaKnown RBP14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 SLC24A5Q71RS6 500 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 MAEAQ7L5Y9 396 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 CABP7Q86V35 215 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 RNF149Q8NC42 400 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 SP7Q8TDD2 431 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 ASAP3Q8TDY4 903 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 CDX2Q99626 313 aaPredicted RBP14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 NT5C3AQ9H0P0 336 aa14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 SRPRBQ9Y5M8 271 aaKnown RBP14.08□□□□□ -0.16
CCDC90B-216ENST00000529856 F13A1P00488 732 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 STAG3L1P0CL83 205 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 ZSCAN20P17040 1043 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 SFPQP23246 707 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 GLRA2P23416 452 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 MARCKSP29966 332 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 UBA7P41226 1012 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 NASPP49321 788 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 PTENP60484 403 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 GRB10Q13322 594 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 PKP1Q13835 747 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 TFDP1Q14186 410 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 BECN1Q14457 450 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 SLC39A14Q15043 492 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 ZRSR1Q15695 479 aaKnown RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 KCNK18Q7Z418 384 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 IFNLR1Q8IU57 520 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 NPAS4Q8IUM7 802 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 ZNF396Q96N95 335 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 YME1L1Q96TA2 773 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 PLIN2Q99541 437 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 POLR3FQ9H1D9 316 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 MINDY3Q9H8M7 445 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 CHST12Q9NRB3 414 aa14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 FBXO2Q9UK22 296 aaPredicted RBP14.07□□□□□ -0.16
CCDC90B-216ENST00000529856 LINC01553A4QN01 128 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 DGKIO75912 1065 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 PHKA2P46019 1235 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 CAPSQ13938 189 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 TMEM119Q4V9L6 283 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 FAM102BQ5T8I3 360 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 CATSPER4Q7RTX7 472 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 CDK5RAP3Q96JB5 506 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 NFKBIZQ9BYH8 718 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 CCSER1Q9C0I3 900 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 CSRNP2Q9H175 543 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 ELAC1Q9H777 363 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 RC3H2Q9HBD1 1191 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 TFIP11Q9UBB9 837 aaKnown RBP14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 LRFN2Q9ULH4 789 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 PCDHB7Q9Y5E2 793 aa14.06□□□□□ -0.16
CCDC90B-216ENST00000529856 MYH15Q9Y2K3 1946 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 MYO9BQ13459 2157 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 A0A0U1RQF3 1178 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 ERVK-21P61565 698 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 PCBP1Q15365 356 aaKnown RBP eCLIP14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 RINT1Q6NUQ1 792 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 C1orf186Q6ZWK4 172 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 LINC00301Q8NCQ3 95 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 CALML4Q96GE6 196 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 CLIC6Q96NY7 704 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 PRDM12Q9H4Q4 367 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 CERS4Q9HA82 394 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 DACT1Q9NYF0 836 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 STXBP5LQ9Y2K9 1186 aa14.05□□□□□ -0.16
CCDC90B-216ENST00000529856 CHD7Q9P2D1 2997 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 HOXA11P31270 313 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 MBTD1Q05BQ5 628 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 STK38Q15208 465 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 SPECC1Q5M775 1068 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 ATL3Q6DD88 541 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 USP49Q70CQ1 688 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 SPRED2Q7Z698 418 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 ECHDC2Q86YB7 292 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 FIBCD1Q8N539 461 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 SYT2Q8N9I0 419 aaPredicted RBP14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 KRI1Q8N9T8 703 aaKnown RBP14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 MYLIPQ8WY64 445 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 ARNTL2Q8WYA1 636 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 BSNDQ8WZ55 320 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 KIFAP3Q92845 792 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 EPSTI1Q96J88 318 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 TGS1Q96RS0 853 aaKnown RBP14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 RUSC1Q9BVN2 902 aa14.04□□□□□ -0.16
CCDC90B-216ENST00000529856 TRAIPQ9BWF2 469 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms