RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 CLLU1OSQ5K130 101 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 PDE12Q6L8Q7 609 aaKnown RBP4.02□□□□□ -1.77
PTPRC-213ENST00000529828 KIAA1841Q6NSI8 718 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 HEATR3Q7Z4Q2 680 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 RALYLQ86SE5 291 aaKnown RBP4.02□□□□□ -1.77
PTPRC-213ENST00000529828 CCDC60Q8IWA6 550 aaPredicted RBP4.02□□□□□ -1.77
PTPRC-213ENST00000529828 PLEKHM2Q8IWE5 1019 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 SLC39A11Q8N1S5 342 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 SRBD1Q8N5C6 995 aaKnown RBP4.02□□□□□ -1.77
PTPRC-213ENST00000529828 METTL13Q8N6R0 699 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 MRPL43Q8N983 215 aaKnown RBP4.02□□□□□ -1.77
PTPRC-213ENST00000529828 DTWD2Q8NBA8 298 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 TMEM87AQ8NBN3 555 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 CTCFLQ8NI51 663 aaPredicted RBP4.02□□□□□ -1.77
PTPRC-213ENST00000529828 RASGRP4Q8TDF6 673 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 BCL7CQ8WUZ0 217 aaPredicted RBP4.02□□□□□ -1.77
PTPRC-213ENST00000529828 RSAD2Q8WXG1 361 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 NECTIN4Q96NY8 510 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 SDF4Q9BRK5 362 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 TMEM117Q9H0C3 514 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 KCNH7Q9NS40 1196 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 C1orf112Q9NSG2 853 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 SPG21Q9NZD8 308 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 CA14Q9ULX7 337 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 LZTS1Q9Y250 596 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 SQORQ9Y6N5 450 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 FRYQ5TBA9 3013 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 CEP295Q9C0D2 2601 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 USP24Q9UPU5 2620 aa4.02□□□□□ -1.77
PTPRC-213ENST00000529828 ZBTB42B2RXF5 422 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 E7EWF7 191 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 GPR182O15218 404 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ZC3H11AO75152 810 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 CSDE1O75534 798 aaKnown RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 C22orf31O95567 290 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 LMNAP02545 664 aaKnown RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 SSBP05455 408 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 DCNP07585 359 aaKnown RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 PPM1AP35813 382 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 NT5C2P49902 561 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 CLCN5P51795 746 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ITIH3Q06033 890 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 DSC3Q14574 896 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ATAT1Q5SQI0 421 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 PDXDC2PQ6P474 469 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 PLPPR4Q7Z2D5 763 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 CABP7Q86V35 215 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 CKAP2LQ8IYA6 745 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ZNF654Q8IZM8 581 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ZDHHC14Q8IZN3 488 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 VPS52Q8N1B4 723 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 NME8Q8N427 588 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 LRRC71Q8N4P6 559 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 LPPQ93052 612 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 MXRA8Q9BRK3 442 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 SPZ1Q9BXG8 430 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 GBP3Q9H0R5 595 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 AGO4Q9HCK5 861 aaKnown RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 CYP26B1Q9NR63 512 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 AKT3Q9Y243 479 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 KRBA1A5PL33 1030 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 GPR32O75388 356 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 RPLP2P05387 115 aaKnown RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ATP4AP20648 1035 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 KIF5BP33176 963 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 CRYBB1P53674 252 aaPredicted RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 BCAR1P56945 870 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 FAM189BP81408 668 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 HDAC1Q13547 482 aaPredicted RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 TDGQ13569 410 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 SART3Q15020 963 aaKnown RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 DIEXFQ68CQ4 756 aaKnown RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 SWSAP1Q6NVH7 229 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 NFXL1Q6ZNB6 911 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 CCDC149Q6ZUS6 474 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ECHDC2Q86YB7 292 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ACSF2Q96CM8 615 aaPredicted RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 TMEM169Q96HH4 297 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 SCLT1Q96NL6 688 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 LRRC2Q9BYS8 371 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ZBP1Q9H171 429 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 KCNK12Q9HB15 430 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 LY9Q9HBG7 655 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 ZNF302Q9NR11 478 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 TSR3Q9UJK0 312 aaKnown RBP4.01□□□□□ -1.77
PTPRC-213ENST00000529828 DUSP12Q9UNI6 340 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 INPP5FQ9Y2H2 1132 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 NFASCO94856 1347 aa4.01□□□□□ -1.77
PTPRC-213ENST00000529828 MEIS3P2A8K0S8 358 aa4□□□□□ -1.77
PTPRC-213ENST00000529828 HIP1O00291 1037 aa4□□□□□ -1.77
PTPRC-213ENST00000529828 C2CD2LO14523 706 aa4□□□□□ -1.77
PTPRC-213ENST00000529828 HOXA2O43364 376 aa4□□□□□ -1.77
PTPRC-213ENST00000529828 HBP1O60381 514 aa4□□□□□ -1.77
PTPRC-213ENST00000529828 B4GALT3O60512 393 aa4□□□□□ -1.77
PTPRC-213ENST00000529828 N4BP1O75113 896 aaKnown RBP4□□□□□ -1.77
PTPRC-213ENST00000529828 LRRN2O75325 713 aa4□□□□□ -1.77
PTPRC-213ENST00000529828 ZSCAN20P17040 1043 aaPredicted RBP4□□□□□ -1.77
PTPRC-213ENST00000529828 GBP2P32456 591 aaPredicted RBP4□□□□□ -1.77
PTPRC-213ENST00000529828 ALDH7A1P49419 539 aaKnown RBP4□□□□□ -1.77
PTPRC-213ENST00000529828 NLRP11P59045 1033 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms