RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CHD8Q9HCK8 2581 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 CCDC195A0A1B0GUA6 201 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 ANHXE9PGG2 379 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 MEIS1O00470 390 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 C1RP00736 705 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 SKIP12755 728 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 GLULP15104 373 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 ATP4AP20648 1035 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 MAGEA9P43362 315 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 MIS18BP1Q6P0N0 1132 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 TMEM173Q86WV6 379 aaPredicted RBP13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 ZBTB44Q8NCP5 570 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 CTCFLQ8NI51 663 aaPredicted RBP13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 HDAC7Q8WUI4 952 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 CHAMP1Q96JM3 812 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 BCO2Q9BYV7 579 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 EPC1Q9H2F5 836 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 SENP2Q9HC62 589 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 CEP131Q9UPN4 1083 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 MAFBQ9Y5Q3 323 aaPredicted RBP13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 GPR179Q6PRD1 2367 aa13.22□□□□□ -0.29
AMBRA1-207ENST00000529553 DCDC2BA2VCK2 349 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 POTEMA6NI47 508 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 LAMTOR5O43504 91 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 ZC3H11AO75152 810 aaKnown RBP eCLIP13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 CCNE2O96020 404 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 FOSP01100 380 aaPredicted RBP13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 CNPP09543 421 aaKnown RBP13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 LAMP2P13473 410 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 SWSAP1Q6NVH7 229 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 NIPA1Q7RTP0 329 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 CCDC60Q8IWA6 550 aaPredicted RBP13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 NELL1Q92832 810 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 PPP1R16BQ96T49 567 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 NRDE2Q9H7Z3 1164 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 MRPL17Q9NRX2 175 aaKnown RBP13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 ZSCAN32Q9NX65 697 aa13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 ZFP37Q9Y6Q3 630 aaPredicted RBP13.21□□□□□ -0.29
AMBRA1-207ENST00000529553 CLUHO75153 1309 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 LOXHD1Q8IVV2 1947 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 KANSL1LA0AUZ9 987 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 LILRB5O75023 590 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 DDAH1O94760 285 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 DARSP14868 501 aaKnown RBP13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 TGM1P22735 817 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 UBE2SQ16763 222 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 NOMO2Q5JPE7 1267 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 EFCAB12Q6NXP0 572 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 GLB1LQ6UWU2 654 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 LINC01465Q8N7H1 131 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 MYADMQ96S97 322 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 DDX23Q9BUQ8 820 aaKnown RBP13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 AKT3Q9Y243 479 aa13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
AMBRA1-207ENST00000529553 DENND4AQ7Z401 1863 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 ALDH2P05091 517 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 PHKA2P46019 1235 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 PRKCQQ04759 706 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 CSTF1Q05048 431 aaKnown RBP13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 HDAC1Q13547 482 aaPredicted RBP13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 RSPO2Q6UXX9 243 aaPredicted RBP13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 CKAP2LQ8IYA6 745 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 TMTC2Q8N394 836 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 SRBD1Q8N5C6 995 aaKnown RBP13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 NCOA7Q8NI08 942 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 BCL7CQ8WUZ0 217 aaPredicted RBP13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 VN1R3Q9BXE9 311 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 FAM126AQ9BYI3 521 aaPredicted RBP13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 TBC1D13Q9NVG8 400 aa13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 SPATA6Q9NWH7 488 aaPredicted RBP13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 SMG5Q9UPR3 1016 aaKnown RBP13.19□□□□□ -0.3
AMBRA1-207ENST00000529553 SPTBN2O15020 2390 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 LAMA4Q16363 1823 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 INPPL1O15357 1258 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 DHX15O43143 795 aaKnown RBP13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 ZNF623O75123 536 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 OFD1O75665 1012 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 ADH1AP07327 375 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 SLC11A1P49279 550 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 GPC3P51654 580 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 CLCN3P51790 818 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 RNASELQ05823 741 aaKnown RBP13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 HTR4Q13639 388 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 FAM167AQ96KS9 214 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 MTA3Q9BTC8 594 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 FOXQ1Q9C009 403 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 PLEKHA4Q9H4M7 779 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 LY9Q9HBG7 655 aa13.18□□□□□ -0.3
AMBRA1-207ENST00000529553 TBC1D22BQ9NU19 505 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms