RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 NCAPH2Q6IBW4 605 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 CATSPER4Q7RTX7 472 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 RNF135Q8IUD6 432 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 NECAB1Q8N987 351 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 CEP170P1Q96L14 293 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 MBOAT7Q96N66 472 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 DACT1Q9NYF0 836 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 SPG21Q9NZD8 308 aa14.58□□□□□ -0.08
CPSF1-204ENST00000529288 PIN4Q9Y237 131 aaKnown RBP14.58□□□□□ -0.08
CPSF1-204ENST00000529288 USP15Q9Y4E8 981 aaPredicted RBP14.58□□□□□ -0.08
CPSF1-204ENST00000529288 A0A0U1RQF3 1178 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 MAFO75444 373 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-204ENST00000529288 EOMESO95936 686 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 SFPQP23246 707 aaKnown RBP eCLIP14.57□□□□□ -0.08
CPSF1-204ENST00000529288 TECP42680 631 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 QARSP47897 775 aaKnown RBP14.57□□□□□ -0.08
CPSF1-204ENST00000529288 POLGP54098 1239 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-204ENST00000529288 AK2P54819 239 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 PLCB3Q01970 1234 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 PDE12Q6L8Q7 609 aaKnown RBP14.57□□□□□ -0.08
CPSF1-204ENST00000529288 B3GNT9Q6UX72 402 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 ANO5Q75V66 913 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 FAM177A1Q8N128 213 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-204ENST00000529288 LPPQ93052 612 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 RPGRIP1Q96KN7 1286 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 FAM20AQ96MK3 541 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 JPH2Q9BR39 696 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-204ENST00000529288 INO80BQ9C086 356 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-204ENST00000529288 CYP26B1Q9NR63 512 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 INPP5FQ9Y2H2 1132 aa14.57□□□□□ -0.08
CPSF1-204ENST00000529288 HIDE1A8MVS5 230 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 FSCN2O14926 492 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 DKC1O60832 514 aaKnown RBP eCLIP14.56□□□□□ -0.08
CPSF1-204ENST00000529288 BAG4O95429 457 aaKnown RBP14.56□□□□□ -0.08
CPSF1-204ENST00000529288 EYA4O95677 639 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 SRGAP2CP0DJJ0 459 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 SRGAP2BP0DMP2 458 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 PPM1AP35813 382 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 COASYQ13057 564 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 ANKRD1Q15327 319 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 ERICH6BQ5W0A0 696 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
CPSF1-204ENST00000529288 TMEM87AQ8NBN3 555 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 SMRP1Q8NCR6 262 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 VN1R2Q8NFZ6 395 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 SLC7A3Q8WY07 619 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 WASF1Q92558 559 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 TMEM143Q96AN5 459 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 DYDC2Q96IM9 177 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 CEP89Q96ST8 783 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 CDCA3Q99618 268 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-204ENST00000529288 GBP3Q9H0R5 595 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 CHST12Q9NRB3 414 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 VAV3Q9UKW4 847 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 LZTS1Q9Y250 596 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 BRWD1Q9NSI6 2320 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 MYO7AQ13402 2215 aa14.56□□□□□ -0.08
CPSF1-204ENST00000529288 LOXHD1Q8IVV2 1947 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 EVPLQ92817 2033 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 IGKV6-21A0A0C4DH24 114 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 FAM205CA6NFA0 338 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 ZC3H11AO75152 810 aaKnown RBP eCLIP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 CTDNEP1O95476 244 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 P4HBP07237 508 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 GCFC2P16383 781 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 ATF7P17544 494 aaPredicted RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 KRT2P35908 639 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 PHKA2P46019 1235 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 ALDH7A1P49419 539 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 BCAR1P56945 870 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 CYP4A11Q02928 519 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 RNASELQ05823 741 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 NR5A1Q13285 461 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 PPP2R5CQ13362 524 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 CTTNQ14247 550 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 EARS2Q5JPH6 523 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 PPP4R3AQ6IN85 833 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 ZNF598Q86UK7 904 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 ZNF410Q86VK4 478 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 POTEDQ86YR6 584 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 NAP1L4Q99733 375 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 MRPL9Q9BYD2 267 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 BRMS1Q9HCU9 246 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 KCNMB3Q9NPA1 279 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 NGRNQ9NPE2 291 aaKnown RBP14.55□□□□□ -0.08
CPSF1-204ENST00000529288 PPP4R2Q9NY27 417 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 RGL1Q9NZL6 768 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 COL4A3BPQ9Y5P4 624 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 STK36Q9NRP7 1315 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 NCOR1O75376 2440 aa14.55□□□□□ -0.08
CPSF1-204ENST00000529288 CXCL14O95715 111 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 SKIP12755 728 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 SP100P23497 879 aaPredicted RBP14.54□□□□□ -0.08
CPSF1-204ENST00000529288 SMC1AQ14683 1233 aaKnown RBP14.54□□□□□ -0.08
CPSF1-204ENST00000529288 EPHA7Q15375 998 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 XKR9Q5GH70 373 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 ANKRD54Q6NXT1 300 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 GLB1LQ6UWU2 654 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 OTUD6AQ7L8S5 288 aa14.54□□□□□ -0.08
CPSF1-204ENST00000529288 TPH2Q8IWU9 490 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms