RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 SPECC1Q5M775 1068 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 TYW1BQ6NUM6 668 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 MIS18BP1Q6P0N0 1132 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 ZC3H14Q6PJT7 736 aaKnown RBP20.17■□□□□ 0.82
LTBP3-211ENST00000528966 C15orf39Q6ZRI6 1047 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 PPFIBP1Q86W92 1011 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 CCDC82Q8N4S0 544 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 SUMF1Q8NBK3 374 aa20.17■□□□□ 0.82
LTBP3-211ENST00000528966 SPDYE4A6NLX3 237 aa20.16■□□□□ 0.82
LTBP3-211ENST00000528966 EFCAB12Q6NXP0 572 aa20.16■□□□□ 0.82
LTBP3-211ENST00000528966 LRRC71Q8N4P6 559 aa20.16■□□□□ 0.82
LTBP3-211ENST00000528966 ANO3Q9BYT9 981 aa20.16■□□□□ 0.82
LTBP3-211ENST00000528966 NRDE2Q9H7Z3 1164 aa20.16■□□□□ 0.82
LTBP3-211ENST00000528966 GALTP07902 379 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 DARSP14868 501 aaKnown RBP20.15■□□□□ 0.82
LTBP3-211ENST00000528966 RFX1P22670 979 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 SREBF1P36956 1147 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 COL9A3Q14050 684 aaPredicted RBP20.15■□□□□ 0.82
LTBP3-211ENST00000528966 WWC2Q6AWC2 1192 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 NIPA1Q7RTP0 329 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 RAB11FIP4Q86YS3 637 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 C1orf210Q8IVY1 113 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 SLC44A3Q8N4M1 653 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 KLHL5Q96PQ7 755 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 MAP7D2Q96T17 732 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 RIC8AQ9NPQ8 531 aa20.15■□□□□ 0.82
LTBP3-211ENST00000528966 FAM86B1E9PN63 330 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 MAGEB2O15479 319 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 B4GALT3O60512 393 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 CNPP09543 421 aaKnown RBP20.14■□□□□ 0.81
LTBP3-211ENST00000528966 FAM86B2P0C5J1 330 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 SRFP11831 508 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 GPC3P51654 580 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 TMTC3Q6ZXV5 915 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 LPPQ93052 612 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 TBC1D13Q9NVG8 400 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 DACT1Q9NYF0 836 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 DNAJB4Q9UDY4 337 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 CEP131Q9UPN4 1083 aa20.14■□□□□ 0.81
LTBP3-211ENST00000528966 IGLV3-22A0A075B6J6 115 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 POTEMA6NI47 508 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 MEIS3P2A8K0S8 358 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 IPO5O00410 1097 aaKnown RBP20.13■□□□□ 0.81
LTBP3-211ENST00000528966 SH2B2O14492 632 aaPredicted RBP20.13■□□□□ 0.81
LTBP3-211ENST00000528966 LILRB3O75022 631 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 CSDE1O75534 798 aaKnown RBP20.13■□□□□ 0.81
LTBP3-211ENST00000528966 FOSP01100 380 aaPredicted RBP20.13■□□□□ 0.81
LTBP3-211ENST00000528966 KLRC2P26717 231 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 PHKA2P46019 1235 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 LONRF3Q496Y0 759 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 DIEXFQ68CQ4 756 aaKnown RBP20.13■□□□□ 0.81
LTBP3-211ENST00000528966 PHLDB3Q6NSJ2 640 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 POTEGQ6S5H5 508 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 NFXL1Q6ZNB6 911 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 PLA2G4DQ86XP0 818 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 GPR152Q8TDT2 470 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 MYADMQ96S97 322 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 EPS15L1Q9UBC2 864 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 SIT1Q9Y3P8 196 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 MIA3Q5JRA6 1907 aa20.13■□□□□ 0.81
LTBP3-211ENST00000528966 CCDC69A6NI79 296 aa20.12■□□□□ 0.81
LTBP3-211ENST00000528966 PRC1O43663 620 aa20.12■□□□□ 0.81
LTBP3-211ENST00000528966 SSBP05455 408 aaKnown RBP eCLIP20.12■□□□□ 0.81
LTBP3-211ENST00000528966 GLULP15104 373 aa20.12■□□□□ 0.81
LTBP3-211ENST00000528966 GBP2P32456 591 aaPredicted RBP20.12■□□□□ 0.81
LTBP3-211ENST00000528966 ZNF76P36508 570 aa20.12■□□□□ 0.81
LTBP3-211ENST00000528966 SLC11A1P49279 550 aa20.12■□□□□ 0.81
LTBP3-211ENST00000528966 NONOQ15233 471 aaKnown RBP eCLIP20.12■□□□□ 0.81
LTBP3-211ENST00000528966 CASC1Q6TDU7 716 aa20.12■□□□□ 0.81
LTBP3-211ENST00000528966 MAML2Q8IZL2 1156 aaPredicted RBP20.12■□□□□ 0.81
LTBP3-211ENST00000528966 ZNF710Q8N1W2 664 aa20.12■□□□□ 0.81
LTBP3-211ENST00000528966 CMASQ8NFW8 434 aaPredicted RBP20.12■□□□□ 0.81
LTBP3-211ENST00000528966 MTA3Q9BTC8 594 aa20.12■□□□□ 0.81
LTBP3-211ENST00000528966 EMILIN2Q9BXX0 1053 aa20.12■□□□□ 0.81
LTBP3-211ENST00000528966 WDR6Q9NNW5 1121 aaKnown RBP20.12■□□□□ 0.81
LTBP3-211ENST00000528966 CLUHO75153 1309 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 CARNS1A5YM72 827 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 TMOD1P28289 359 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 NAPAP54920 295 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 NOMO2Q5JPE7 1267 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 ZNF746Q6NUN9 644 aaPredicted RBP20.11■□□□□ 0.81
LTBP3-211ENST00000528966 RSPH1Q8WYR4 309 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 TRAIPQ9BWF2 469 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 GBP3Q9H0R5 595 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 MAN1C1Q9NR34 630 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 ARHGEF3Q9NR81 526 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 GABBR1Q9UBS5 961 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 INPP5FQ9Y2H2 1132 aa20.11■□□□□ 0.81
LTBP3-211ENST00000528966 CNTNAP5Q8WYK1 1306 aa20.1■□□□□ 0.81
LTBP3-211ENST00000528966 CCDC195A0A1B0GUA6 201 aa20.1■□□□□ 0.81
LTBP3-211ENST00000528966 IGHDP01880 384 aa20.1■□□□□ 0.81
LTBP3-211ENST00000528966 CALM1P0DP23 149 aa20.1■□□□□ 0.81
LTBP3-211ENST00000528966 CALM2P0DP24 149 aa20.1■□□□□ 0.81
LTBP3-211ENST00000528966 CALM3P0DP25 149 aa20.1■□□□□ 0.81
LTBP3-211ENST00000528966 GSPT1P15170 499 aaKnown RBP20.1■□□□□ 0.81
LTBP3-211ENST00000528966 CLK2P49760 499 aaKnown RBP20.1■□□□□ 0.81
LTBP3-211ENST00000528966 ADCY7P51828 1080 aa20.1■□□□□ 0.81
LTBP3-211ENST00000528966 GLB1LQ6UWU2 654 aa20.1■□□□□ 0.81
LTBP3-211ENST00000528966 ZNF280BQ86YH2 543 aa20.1■□□□□ 0.81
LTBP3-211ENST00000528966 TEX2Q8IWB9 1127 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms