RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 YBX2Q9Y2T7 364 aaKnown RBP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 TELO2Q9Y4R8 837 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 GPC6Q9Y625 555 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 SIP14410 1827 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 COL4A4P53420 1690 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-218ENST00000528877 IGKV6D-21A0A0A0MT36 114 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 ABHD14A-ACY1A0A1B0GW23 586 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 FAM86B1E9PN63 330 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 SORBS3O60504 671 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 EIF5BO60841 1220 aaKnown RBP8.03□□□□□ -1.12
ITGB1-218ENST00000528877 ATG7O95352 703 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 FAM86B2P0C5J1 330 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 GNA11P29992 359 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 CIITAP33076 1130 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 SLC26A2P50443 739 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 CLDN10P78369 228 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 ZNF200P98182 395 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-218ENST00000528877 GAS6Q14393 721 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 GRIN2CQ14957 1233 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 PLEKHG4Q58EX7 1191 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 FAM26DQ5JW98 314 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 HERC6Q8IVU3 1022 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 ZNF295-AS1Q8N0V1 137 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 DAGLBQ8NCG7 672 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 MAFAQ8NHW3 353 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-218ENST00000528877 MYLIPQ8WY64 445 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 PHKBQ93100 1093 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 LENG9Q96B70 501 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 PCYT2Q99447 389 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 RNPEPQ9H4A4 650 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 SMARCAD1Q9H4L7 1026 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 AGO4Q9HCK5 861 aaKnown RBP8.03□□□□□ -1.12
ITGB1-218ENST00000528877 C6orf50Q9HD87 102 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 TMEM260Q9NX78 707 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 ATXN7L1Q9ULK2 861 aaPredicted RBP8.03□□□□□ -1.12
ITGB1-218ENST00000528877 MICAL3Q7RTP6 2002 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 STK36Q9NRP7 1315 aa8.03□□□□□ -1.12
ITGB1-218ENST00000528877 RSPH10B2B2RC85 870 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 DHX15O43143 795 aaKnown RBP8.02□□□□□ -1.13
ITGB1-218ENST00000528877 TREHO43280 583 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 DEXIO95424 95 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 CCNE2O96020 404 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 CENPBP07199 599 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-218ENST00000528877 RSPH10BP0C881 870 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 POU3F3P20264 500 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-218ENST00000528877 MX2P20592 715 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 THPOP40225 353 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 MAP2K3P46734 347 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 KCNJ6P48051 423 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 EPHA4P54764 986 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 CHMP4BP1P59074 171 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 ACTR2P61160 394 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 FOXK2Q01167 660 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 PPFIA1Q13136 1202 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 TEAD4Q15561 434 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 NPY5RQ15761 445 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 GRIK4Q16099 956 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 TCTN1Q2MV58 587 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 MARCH8Q5T0T0 291 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 FAM43BQ6ZT52 329 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-218ENST00000528877 PLPPR4Q7Z2D5 763 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 TMEM151AQ8N4L1 468 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 SVOPQ8N4V2 548 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 CYP2W1Q8TAV3 490 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 APBB2Q92870 758 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 PGBD1Q96JS3 809 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 SDF4Q9BRK5 362 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 SLC26A6Q9BXS9 759 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 UPF3BQ9BZI7 483 aaKnown RBP8.02□□□□□ -1.13
ITGB1-218ENST00000528877 FTOQ9C0B1 505 aaKnown RBP eCLIP8.02□□□□□ -1.13
ITGB1-218ENST00000528877 NKX2-4Q9H2Z4 354 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 RUBCNLQ9H714 662 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 SLC28A3Q9HAS3 691 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 NCOA5Q9HCD5 579 aaKnown RBP8.02□□□□□ -1.13
ITGB1-218ENST00000528877 SETD4Q9NVD3 440 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 TUBE1Q9UJT0 475 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 NAP1L2Q9ULW6 460 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-218ENST00000528877 BDP1A6H8Y1 2624 aa8.02□□□□□ -1.13
ITGB1-218ENST00000528877 TRIP12Q14669 1992 aaPredicted RBP8.02□□□□□ -1.13
ITGB1-218ENST00000528877 COL1A2P08123 1366 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 RRN3P2A6NIE6 340 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 IPO5O00410 1097 aaKnown RBP8.01□□□□□ -1.13
ITGB1-218ENST00000528877 ADAMTS3O15072 1205 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 CDKL5O76039 1030 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 GJB5O95377 273 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 CA3P07451 260 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 ARP10275 920 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 ATP4AP20648 1035 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 RABGGTBP53611 331 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 PSMA6P60900 246 aaKnown RBP8.01□□□□□ -1.13
ITGB1-218ENST00000528877 DEFB103AP81534 67 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 AKAP17AQ02040 695 aaKnown RBP8.01□□□□□ -1.13
ITGB1-218ENST00000528877 SP4Q02446 784 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 MGAT3Q09327 533 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 IKBKEQ14164 716 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 UTP14CQ5TAP6 766 aaKnown RBP8.01□□□□□ -1.13
ITGB1-218ENST00000528877 GALNT17Q6IS24 598 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 ZNF746Q6NUN9 644 aaPredicted RBP8.01□□□□□ -1.13
ITGB1-218ENST00000528877 ABHD15Q6UXT9 468 aa8.01□□□□□ -1.13
ITGB1-218ENST00000528877 SLC9A9Q8IVB4 645 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms