RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 EPHA7Q15375 998 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 CEP55Q53EZ4 464 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 PRAMEF19Q5SWL8 479 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 POTEGQ6S5H5 508 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 LRRC55Q6ZSA7 311 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 GOLGA1Q92805 767 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 SLC5A5Q92911 643 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 LENG9Q96B70 501 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 RIT2Q99578 217 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 CARD6Q9BX69 1037 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 DEF6Q9H4E7 631 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 METTL14Q9HCE5 456 aaKnown RBP12.9□□□□□ -0.34
USF1-208ENST00000528768 SEL1LQ9UBV2 794 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 TCEAL9Q9UHQ7 104 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 VAV3Q9UKW4 847 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.9□□□□□ -0.34
USF1-208ENST00000528768 MRFAP1Q9Y605 127 aa12.9□□□□□ -0.34
USF1-208ENST00000528768 UBE4BO95155 1302 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 PDXKO00764 312 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 OPLAHO14841 1288 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 GPR37L1O60883 481 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 TUBBP07437 444 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 SPATA31C1P0DKV0 1188 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 HNRNPH3P31942 346 aaKnown RBP12.89□□□□□ -0.35
USF1-208ENST00000528768 PBX2P40425 430 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 ACLYP53396 1101 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 ADAM9Q13443 819 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 GIT2Q14161 759 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 ELF2Q15723 593 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 WHAMMP3Q1A5X7 153 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 ZCWPW2Q504Y3 356 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 FRMD5Q7Z6J6 570 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 MSL3Q8N5Y2 521 aaKnown RBP12.89□□□□□ -0.35
USF1-208ENST00000528768 ACRBPQ8NEB7 543 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 GJA10Q969M2 543 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 WDR24Q96S15 920 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 TINF2Q9BSI4 451 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 ZNF577Q9BSK1 485 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 TTYH3Q9C0H2 523 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 CDC23Q9UJX2 597 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 COG5Q9UP83 839 aa12.89□□□□□ -0.35
USF1-208ENST00000528768 IGLV3-22A0A075B6J6 115 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
USF1-208ENST00000528768 TLR3O15455 904 aaKnown RBP12.88□□□□□ -0.35
USF1-208ENST00000528768 PGK1P00558 417 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 COPB2P35606 906 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 HSD17B4P51659 736 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 KIF5AQ12840 1032 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 KNOP1Q1ED39 458 aaKnown RBP12.88□□□□□ -0.35
USF1-208ENST00000528768 CCDC122Q5T0U0 273 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 NCAPG2Q86XI2 1143 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 GPR161Q8N6U8 529 aaKnown RBP12.88□□□□□ -0.35
USF1-208ENST00000528768 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
USF1-208ENST00000528768 GOLGA5Q8TBA6 731 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 SYN2Q92777 582 aaPredicted RBP12.88□□□□□ -0.35
USF1-208ENST00000528768 JAKMIP2Q96AA8 810 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 GLT1D1Q96MS3 346 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 CHP1Q99653 195 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 MXRA8Q9BRK3 442 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 MAF1Q9H063 256 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 NHEJ1Q9H9Q4 299 aaPredicted RBP12.88□□□□□ -0.35
USF1-208ENST00000528768 TYW1Q9NV66 732 aaKnown RBP12.88□□□□□ -0.35
USF1-208ENST00000528768 TBC1D7Q9P0N9 293 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 TRAF3IP3Q9Y228 551 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 SIK3Q9Y2K2 1263 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 PCDHA2Q9Y5H9 948 aa12.88□□□□□ -0.35
USF1-208ENST00000528768 PLXNA1Q9UIW2 1896 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 MUC6Q6W4X9 2439 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 GRXCR1A8MXD5 290 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 MEIS1O00470 390 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 SLC16A3O15427 465 aaKnown RBP12.87□□□□□ -0.35
USF1-208ENST00000528768 ADAMTS4O75173 837 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 TADA3O75528 432 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 PSMD10O75832 226 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 EPB41P11171 864 aaKnown RBP12.87□□□□□ -0.35
USF1-208ENST00000528768 POU3F3P20264 500 aaPredicted RBP12.87□□□□□ -0.35
USF1-208ENST00000528768 GHRHRQ02643 423 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 BMT2Q1RMZ1 405 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 ARSHQ5FYA8 562 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 XRRA1Q6P2D8 792 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
USF1-208ENST00000528768 ZNF365Q70YC5 407 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 C16orf59Q7L2K0 433 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 TPH2Q8IWU9 490 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 ZC3H3Q8IXZ2 948 aaKnown RBP12.87□□□□□ -0.35
USF1-208ENST00000528768 SLC35F6Q8N357 371 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 SCFD1Q8WVM8 642 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 HSD17B14Q9BPX1 270 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 REEP2Q9BRK0 252 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 BHMT2Q9H2M3 363 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 IL23AQ9NPF7 189 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 OLFML3Q9NRN5 406 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 OGFRQ9NZT2 677 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 CEP72Q9P209 647 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 ODF2LQ9ULJ1 636 aa12.87□□□□□ -0.35
USF1-208ENST00000528768 PLAGL2Q9UPG8 496 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms