RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 HOMER3Q9NSC5 361 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 CCPG1Q9ULG6 757 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 ROBO1Q9Y6N7 1651 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 MMP10P09238 476 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 POLR2MP0CAP2 368 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 PAPOLAP51003 745 aaKnown RBP19.25■□□□□ 0.67
LTBP3-210ENST00000528516 GRM1Q13255 1194 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 MIIPQ5JXC2 388 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 CLEC4GQ6UXB4 293 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 VSIG1Q86XK7 387 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 ZNF577Q9BSK1 485 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 LARSQ9P2J5 1176 aaKnown RBP19.25■□□□□ 0.67
LTBP3-210ENST00000528516 ANKFY1Q9P2R3 1169 aa19.25■□□□□ 0.67
LTBP3-210ENST00000528516 HSPA1LP34931 641 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 SLC17A8Q8NDX2 589 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 IQCGQ9H095 443 aaKnown RBP19.24■□□□□ 0.67
LTBP3-210ENST00000528516 ZCWPW1Q9H0M4 648 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 AGTPBP1Q9UPW5 1226 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
LTBP3-210ENST00000528516 STXBP3O00186 592 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 SERPING1P05155 500 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 UNC13DQ70J99 1090 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 USP37Q86T82 979 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 GSTA1P08263 222 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 NEK9Q8TD19 979 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 ZMYND12Q9H0C1 365 aa19.24■□□□□ 0.67
LTBP3-210ENST00000528516 SMNDC1O75940 238 aaKnown RBP eCLIP19.23■□□□□ 0.67
LTBP3-210ENST00000528516 BMP3P12645 472 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 ITGA4P13612 1032 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 GCLMP48507 274 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 BYSLQ13895 437 aaKnown RBP19.23■□□□□ 0.67
LTBP3-210ENST00000528516 ERMARDQ5T6L9 678 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 BSPRYQ5W0U4 402 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 GLYCTKQ8IVS8 523 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 NAF1Q96HR8 494 aaKnown RBP19.23■□□□□ 0.67
LTBP3-210ENST00000528516 CORO1CQ9ULV4 474 aaPredicted RBP19.23■□□□□ 0.67
LTBP3-210ENST00000528516 PNMA6FA0A0J9YX94 578 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 LAD1O00515 517 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 COPB2P35606 906 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 GRM4Q14833 912 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 NAB2Q15742 525 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 FIGNQ5HY92 759 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 PPP1R16BQ96T49 567 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 FGFR1OP2Q9NVK5 253 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 NKIRAS1Q9NYS0 192 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 STK17AQ9UEE5 414 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 TACC3Q9Y6A5 838 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 BCL9O00512 1426 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 ADCY8P40145 1251 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 RAD23BP54727 409 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 MTM1Q13496 603 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 ZNF394Q53GI3 561 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 PPP1R21Q6ZMI0 780 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 INTS8Q75QN2 995 aaKnown RBP19.23■□□□□ 0.67
LTBP3-210ENST00000528516 GDAP1Q8TB36 358 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 TEKT4Q8WW24 435 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 POMGNT1Q8WZA1 660 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 CUEDC2Q9H467 287 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 FAM114A2Q9NRY5 505 aa19.23■□□□□ 0.67
LTBP3-210ENST00000528516 F8VZ95 297 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 PDE6CP51160 858 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 EIF3BP55884 814 aaKnown RBP19.22■□□□□ 0.67
LTBP3-210ENST00000528516 INTS5Q6P9B9 1019 aaKnown RBP19.22■□□□□ 0.67
LTBP3-210ENST00000528516 LONP2Q86WA8 852 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 SHISA4Q96DD7 197 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 INPP4AQ96PE3 977 aaPredicted RBP19.22■□□□□ 0.67
LTBP3-210ENST00000528516 AGAP1Q9UPQ3 857 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 A0A087X0T9 212 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 C5orf60A6NFR6 353 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 SHBGP04278 402 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 FAM228BP0C875 321 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 RASA1P20936 1047 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 MSH2P43246 934 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 MUM1Q2TAK8 710 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 MEI1Q5TIA1 1274 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 PBKQ96KB5 322 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 RIOK1Q9BRS2 568 aaKnown RBP19.22■□□□□ 0.67
LTBP3-210ENST00000528516 DDX23Q9BUQ8 820 aaKnown RBP19.22■□□□□ 0.67
LTBP3-210ENST00000528516 ETNK1Q9HBU6 452 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 GNA14O95837 355 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 SLC9A1P19634 815 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 ATP4AP20648 1035 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 NMT1P30419 496 aaKnown RBP19.22■□□□□ 0.67
LTBP3-210ENST00000528516 ARHGAP4P98171 946 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 TSNAXIP1Q2TAA8 658 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 TMC3Q7Z5M5 1100 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 VPS37BQ9H9H4 285 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 TRIM33Q9UPN9 1127 aa19.22■□□□□ 0.67
LTBP3-210ENST00000528516 LRRIQ4A6NIV6 560 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 HNRNPDLO14979 420 aaKnown RBP19.21■□□□□ 0.67
LTBP3-210ENST00000528516 OSTNP61366 133 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 EMC10Q5UCC4 262 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 C1orf131Q8NDD1 294 aaKnown RBP19.21■□□□□ 0.67
LTBP3-210ENST00000528516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.21■□□□□ 0.672e-8■■■■■ 45.4
LTBP3-210ENST00000528516 ANKS1AQ92625 1134 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 LBHD1Q9BQE6 289 aaPredicted RBP19.21■□□□□ 0.67
LTBP3-210ENST00000528516 RAB17Q9H0T7 212 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 RIC8AQ9NPQ8 531 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 TCP11X1B4DZS4 312 aa19.21■□□□□ 0.67
LTBP3-210ENST00000528516 ACSL3O95573 720 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms