RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 CDX2Q99626 313 aaPredicted RBP12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TRAIPQ9BWF2 469 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 NFKBIZQ9BYH8 718 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 BHMT2Q9H2M3 363 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ELAC1Q9H777 363 aaKnown RBP12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 DDX19AQ9NUU7 478 aaKnown RBP12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 COL4A6Q14031 1691 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 LCHNA4D1U4 455 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 LINC01553A4QN01 128 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 MGEA5O60502 916 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 USO1O60763 962 aaKnown RBP12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 DGKIO75912 1065 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SRGAP2CP0DJJ0 459 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ZSCAN22P10073 491 aaPredicted RBP12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 UBA7P41226 1012 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PHKA2P46019 1235 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ERVK-21P61565 698 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RNF149Q8NC42 400 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ZNF689Q96CS4 500 aaPredicted RBP12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CDK5RAP3Q96JB5 506 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SAMD11Q96NU1 681 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TGS1Q96RS0 853 aaKnown RBP12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RC3H2Q9HBD1 1191 aaKnown RBP12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 BMP2KQ9NSY1 1161 aaPredicted RBP12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TMEM161AQ9NX61 479 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 LRFN2Q9ULH4 789 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PCDHB7Q9Y5E2 793 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SRPRBQ9Y5M8 271 aaKnown RBP12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CLIC4Q9Y696 253 aa12.48□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 A0A0U1RQF3 1178 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RBAK-RBAKDNI3L0D1 243 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 EOMESO95936 686 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SKIP12755 728 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 GLRA2P23416 452 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 NASPP49321 788 aaPredicted RBP12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CAPSQ13938 189 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 BECN1Q14457 450 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SLC39A14Q15043 492 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ATL3Q6DD88 541 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FAM173BQ6P4H8 233 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CATSPER4Q7RTX7 472 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CABP7Q86V35 215 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 KIFAP3Q92845 792 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CALML4Q96GE6 196 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ZNF396Q96N95 335 aaPredicted RBP12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PNMA5Q96PV4 448 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 USP28Q96RU2 1077 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TIPINQ9BVW5 301 aa12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 POLR3FQ9H1D9 316 aaPredicted RBP12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 DAXXQ9UER7 740 aaPredicted RBP12.47□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 E9PMD0 336 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 HOXA2O43364 376 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ZNF623O75123 536 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CSDE1O75534 798 aaKnown RBP12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ARHGEF15O94989 841 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 F13A1P00488 732 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 POU3F3P20264 500 aaPredicted RBP12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FGFR4P22455 802 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 AXLP30530 894 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RAB27AP51159 221 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 NCBP1Q09161 790 aaKnown RBP12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 GRB10Q13322 594 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PPP2R5AQ15172 486 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TMEM119Q4V9L6 283 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FAM102BQ5T8I3 360 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CMTR2Q8IYT2 770 aaKnown RBP12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FIBCD1Q8N539 461 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SYT2Q8N9I0 419 aaPredicted RBP12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ASAP3Q8TDY4 903 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 MYLIPQ8WY64 445 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CCSER1Q9C0I3 900 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 C2orf40Q9H1Z8 148 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PRDM12Q9H4Q4 367 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 MINDY3Q9H8M7 445 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 AGPAT5Q9NUQ2 364 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 KCND2Q9NZV8 630 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 KCNG1Q9UIX4 513 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FBXO2Q9UK22 296 aaPredicted RBP12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PIN4Q9Y237 131 aaKnown RBP12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RWDD3Q9Y3V2 267 aa12.46□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 EYSQ5T1H1 3165 aa12.46□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 ADGRA3Q8IWK6 1321 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 FOSL2P15408 326 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 GUCY2CP25092 1073 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 MARCKSP29966 332 aaPredicted RBP12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 NAMPTP43490 491 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 BTG3Q14201 252 aaPredicted RBP12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 ZRSR1Q15695 479 aaKnown RBP12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 TWF2Q6IBS0 349 aaKnown RBP12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 RINT1Q6NUQ1 792 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 C1orf186Q6ZWK4 172 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 MAEAQ7L5Y9 396 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 KCNK18Q7Z418 384 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 ECHDC2Q86YB7 292 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 SPRYD3Q8NCJ5 442 aa12.45□□□□□ -0.42
TMX2-CTNND1-201ENST00000528395 LINC00301Q8NCQ3 95 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms