RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 HERC4Q5GLZ8 1057 aaPredicted RBP29.04■■■□□ 2.24
TRIM3-206ENST00000528227 PLPP4Q5VZY2 271 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 ANO5Q75V66 913 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 TCF25Q9BQ70 676 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 KCNMB3Q9NPA1 279 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 CHST12Q9NRB3 414 aa29.04■■■□□ 2.24
TRIM3-206ENST00000528227 A0A087WZ62 844 aa29.03■■■□□ 2.24
TRIM3-206ENST00000528227 CCDC194A0A1B0GVG4 234 aa29.03■■■□□ 2.24
TRIM3-206ENST00000528227 EML1O00423 815 aa29.03■■■□□ 2.24
TRIM3-206ENST00000528227 PPP2R5CQ13362 524 aa29.03■■■□□ 2.24
TRIM3-206ENST00000528227 HELQQ8TDG4 1101 aa29.03■■■□□ 2.24
TRIM3-206ENST00000528227 FDXACB1Q9BRP7 624 aaPredicted RBP29.03■■■□□ 2.24
TRIM3-206ENST00000528227 SLKQ9H2G2 1235 aaPredicted RBP29.03■■■□□ 2.24
TRIM3-206ENST00000528227 ENTPD7Q9NQZ7 604 aa29.03■■■□□ 2.24
TRIM3-206ENST00000528227 VAV3Q9UKW4 847 aa29.03■■■□□ 2.24
TRIM3-206ENST00000528227 KCNC3Q14003 757 aa29.02■■■□□ 2.24
TRIM3-206ENST00000528227 PPP4R3AQ6IN85 833 aa29.02■■■□□ 2.24
TRIM3-206ENST00000528227 NEK8Q86SG6 692 aa29.02■■■□□ 2.24
TRIM3-206ENST00000528227 ZNF410Q86VK4 478 aa29.02■■■□□ 2.24
TRIM3-206ENST00000528227 FAM20AQ96MK3 541 aa29.02■■■□□ 2.24
TRIM3-206ENST00000528227 NGRNQ9NPE2 291 aaKnown RBP29.02■■■□□ 2.24
TRIM3-206ENST00000528227 SPG21Q9NZD8 308 aa29.02■■■□□ 2.24
TRIM3-206ENST00000528227 SUCLA2Q9P2R7 463 aaPredicted RBP29.02■■■□□ 2.24
TRIM3-206ENST00000528227 TPCN1Q9ULQ1 816 aa29.02■■■□□ 2.24
TRIM3-206ENST00000528227 LOC730098B7Z3J9 87 aa29.01■■■□□ 2.23
TRIM3-206ENST00000528227 PFKFB2O60825 505 aa29.01■■■□□ 2.23
TRIM3-206ENST00000528227 SFPQP23246 707 aaKnown RBP eCLIP29.01■■■□□ 2.23
TRIM3-206ENST00000528227 KRT17Q04695 432 aa29.01■■■□□ 2.23
TRIM3-206ENST00000528227 PLA2G4FQ68DD2 849 aa29.01■■■□□ 2.23
TRIM3-206ENST00000528227 TMEM184AQ6ZMB5 413 aa29.01■■■□□ 2.23
TRIM3-206ENST00000528227 RHPN2Q8IUC4 686 aa29.01■■■□□ 2.23
TRIM3-206ENST00000528227 TRAIPQ9BWF2 469 aa29.01■■■□□ 2.23
TRIM3-206ENST00000528227 MRPL9Q9BYD2 267 aaKnown RBP29.01■■■□□ 2.23
TRIM3-206ENST00000528227 GJB4Q9NTQ9 266 aa29.01■■■□□ 2.23
TRIM3-206ENST00000528227 HIDE1A8MVS5 230 aa29■■■□□ 2.23
TRIM3-206ENST00000528227 GCFC2P16383 781 aaKnown RBP29■■■□□ 2.23
TRIM3-206ENST00000528227 XBP1P17861 261 aa29■■■□□ 2.23
TRIM3-206ENST00000528227 QARSP47897 775 aaKnown RBP29■■■□□ 2.23
TRIM3-206ENST00000528227 SLC39A11Q8N1S5 342 aa29■■■□□ 2.23
TRIM3-206ENST00000528227 JPH2Q9BR39 696 aaPredicted RBP29■■■□□ 2.23
TRIM3-206ENST00000528227 INO80BQ9C086 356 aaPredicted RBP29■■■□□ 2.23
TRIM3-206ENST00000528227 CYP26B1Q9NR63 512 aa29■■■□□ 2.23
TRIM3-206ENST00000528227 DTNBO60941 627 aa28.99■■■□□ 2.23
TRIM3-206ENST00000528227 PHKA2P46019 1235 aa28.99■■■□□ 2.23
TRIM3-206ENST00000528227 KSR1Q8IVT5 923 aa28.99■■■□□ 2.23
TRIM3-206ENST00000528227 OXER1Q8TDS5 423 aa28.99■■■□□ 2.23
TRIM3-206ENST00000528227 SUSD6Q92537 303 aa28.99■■■□□ 2.23
TRIM3-206ENST00000528227 PHF7Q9BWX1 381 aaPredicted RBP28.99■■■□□ 2.23
TRIM3-206ENST00000528227 CCNT1O60563 726 aaKnown RBP28.98■■■□□ 2.23
TRIM3-206ENST00000528227 SRGAP2BP0DMP2 458 aa28.98■■■□□ 2.23
TRIM3-206ENST00000528227 HOXD11P31277 338 aaPredicted RBP28.98■■■□□ 2.23
TRIM3-206ENST00000528227 CBX2Q14781 532 aaPredicted RBP28.98■■■□□ 2.23
TRIM3-206ENST00000528227 TWF2Q6IBS0 349 aaKnown RBP28.98■■■□□ 2.23
TRIM3-206ENST00000528227 PIK3AP1Q6ZUJ8 805 aa28.98■■■□□ 2.23
TRIM3-206ENST00000528227 HAS1Q92839 578 aa28.98■■■□□ 2.23
TRIM3-206ENST00000528227 NLRP4Q96MN2 994 aa28.98■■■□□ 2.23
TRIM3-206ENST00000528227 WRAP73Q9P2S5 460 aaPredicted RBP28.98■■■□□ 2.23
TRIM3-206ENST00000528227 PIN4Q9Y237 131 aaKnown RBP28.98■■■□□ 2.23
TRIM3-206ENST00000528227 TBX3O15119 743 aa28.97■■■□□ 2.23
TRIM3-206ENST00000528227 DKC1O60832 514 aaKnown RBP eCLIP28.97■■■□□ 2.23
TRIM3-206ENST00000528227 CTDNEP1O95476 244 aa28.97■■■□□ 2.23
TRIM3-206ENST00000528227 NPEPPSP55786 919 aa28.97■■■□□ 2.23
TRIM3-206ENST00000528227 ANKRD54Q6NXT1 300 aa28.97■■■□□ 2.23
TRIM3-206ENST00000528227 TMC7Q7Z402 723 aa28.97■■■□□ 2.23
TRIM3-206ENST00000528227 RSPH1Q8WYR4 309 aa28.97■■■□□ 2.23
TRIM3-206ENST00000528227 NAP1L4Q99733 375 aaKnown RBP28.97■■■□□ 2.23
TRIM3-206ENST00000528227 S1PR5Q9H228 398 aa28.97■■■□□ 2.23
TRIM3-206ENST00000528227 P4HBP07237 508 aaKnown RBP28.96■■■□□ 2.23
TRIM3-206ENST00000528227 SKIP12755 728 aa28.96■■■□□ 2.23
TRIM3-206ENST00000528227 TECP42680 631 aa28.96■■■□□ 2.23
TRIM3-206ENST00000528227 BCAR1P56945 870 aa28.96■■■□□ 2.23
TRIM3-206ENST00000528227 LLGL2Q6P1M3 1020 aa28.96■■■□□ 2.23
TRIM3-206ENST00000528227 HFE2Q6ZVN8 426 aa28.96■■■□□ 2.23
TRIM3-206ENST00000528227 ZNF579Q8NAF0 562 aaKnown RBP28.96■■■□□ 2.23
TRIM3-206ENST00000528227 SLC7A3Q8WY07 619 aa28.96■■■□□ 2.23
TRIM3-206ENST00000528227 EDAQ92838 391 aa28.96■■■□□ 2.23
TRIM3-206ENST00000528227 LPPQ93052 612 aa28.96■■■□□ 2.23
TRIM3-206ENST00000528227 IFT122Q9HBG6 1241 aa28.96■■■□□ 2.23
TRIM3-206ENST00000528227 ALDH7A1P49419 539 aaKnown RBP28.95■■■□□ 2.22
TRIM3-206ENST00000528227 ANAPC15P60006 121 aa28.95■■■□□ 2.22
TRIM3-206ENST00000528227 SMC1AQ14683 1233 aaKnown RBP28.95■■■□□ 2.22
TRIM3-206ENST00000528227 EARS2Q5JPH6 523 aaKnown RBP28.95■■■□□ 2.22
TRIM3-206ENST00000528227 CATSPER4Q7RTX7 472 aa28.95■■■□□ 2.22
TRIM3-206ENST00000528227 POTEDQ86YR6 584 aa28.95■■■□□ 2.22
TRIM3-206ENST00000528227 CEP170P1Q96L14 293 aa28.95■■■□□ 2.22
TRIM3-206ENST00000528227 DHX33Q9H6R0 707 aaKnown RBP28.95■■■□□ 2.22
TRIM3-206ENST00000528227 FAM105AQ9NUU6 356 aa28.95■■■□□ 2.22
TRIM3-206ENST00000528227 ORC3Q9UBD5 711 aaPredicted RBP28.95■■■□□ 2.22
TRIM3-206ENST00000528227 PPME1Q9Y570 386 aa28.95■■■□□ 2.22
TRIM3-206ENST00000528227 COL4A3BPQ9Y5P4 624 aa28.95■■■□□ 2.22
TRIM3-206ENST00000528227 NT5C1B-RDH14C9J2C7 533 aa28.94■■■□□ 2.22
TRIM3-206ENST00000528227 RAB27AP51159 221 aa28.94■■■□□ 2.22
TRIM3-206ENST00000528227 AK2P54819 239 aa28.94■■■□□ 2.22
TRIM3-206ENST00000528227 ANKRD1Q15327 319 aa28.94■■■□□ 2.22
TRIM3-206ENST00000528227 EPHA7Q15375 998 aa28.94■■■□□ 2.22
TRIM3-206ENST00000528227 SYCE2Q6PIF2 218 aa28.94■■■□□ 2.22
TRIM3-206ENST00000528227 C4orf19Q8IY42 314 aa28.94■■■□□ 2.22
TRIM3-206ENST00000528227 EXOC8Q8IYI6 725 aa28.94■■■□□ 2.22
TRIM3-206ENST00000528227 MRPL43Q8N983 215 aaKnown RBP28.94■■■□□ 2.22
TRIM3-206ENST00000528227 RPGRIP1Q96KN7 1286 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms