RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 KSR1Q8IVT5 923 aa36.86■■■■□ 3.49
SSSCA1-205ENST00000527920 PRPF31Q8WWY3 499 aaKnown RBP36.86■■■■□ 3.49
SSSCA1-205ENST00000527920 TMEM143Q96AN5 459 aa36.86■■■■□ 3.49
SSSCA1-205ENST00000527920 TUFT1Q9NNX1 390 aa36.86■■■■□ 3.49
SSSCA1-205ENST00000527920 MTRQ99707 1265 aa36.85■■■■□ 3.49
SSSCA1-205ENST00000527920 TMEM117Q9H0C3 514 aa36.85■■■■□ 3.49
SSSCA1-205ENST00000527920 SPTBN5Q9NRC6 3674 aaKnown RBP36.85■■■■□ 3.49
SSSCA1-205ENST00000527920 TBKBP1A7MCY6 615 aa36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 CSDE1O75534 798 aaKnown RBP36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 DGAT1O75907 488 aa36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 EOMESO95936 686 aa36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 SPATA31C1P0DKV0 1188 aa36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 IBSPP21815 317 aaPredicted RBP36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 RARRES1P49788 294 aa36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 LAMTOR4Q0VGL1 99 aa36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 SRGAP1Q7Z6B7 1085 aa36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 FERMT3Q86UX7 667 aa36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 POLR3CQ9BUI4 534 aaPredicted RBP36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 XPNPEP1Q9NQW7 623 aa36.84■■■■□ 3.49
SSSCA1-205ENST00000527920 GRM6O15303 877 aa36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 FGFR1P11362 822 aa36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 MXD4Q14582 209 aaPredicted RBP36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 ZNF598Q86UK7 904 aaKnown RBP36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 C4orf32Q8N8J7 132 aa36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 ERMNQ8TAM6 284 aa36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 RSPH1Q8WYR4 309 aa36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 NSUN3Q9H649 340 aaKnown RBP36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 PLAGL2Q9UPG8 496 aa36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 XIRP2A4UGR9 3374 aa36.83■■■■□ 3.49
SSSCA1-205ENST00000527920 TECP42680 631 aa36.82■■■■□ 3.48
SSSCA1-205ENST00000527920 TFF2Q03403 129 aa36.82■■■■□ 3.48
SSSCA1-205ENST00000527920 CATSPER3Q86XQ3 398 aa36.82■■■■□ 3.48
SSSCA1-205ENST00000527920 CCDC43Q96MW1 224 aaKnown RBP36.82■■■■□ 3.48
SSSCA1-205ENST00000527920 AAASQ9NRG9 546 aa36.82■■■■□ 3.48
SSSCA1-205ENST00000527920 RNF19AQ9NV58 838 aa36.82■■■■□ 3.48
SSSCA1-205ENST00000527920 BRWD1Q9NSI6 2320 aa36.82■■■■□ 3.48
SSSCA1-205ENST00000527920 ARID2Q68CP9 1835 aa36.82■■■■□ 3.48
SSSCA1-205ENST00000527920 RPA1P27694 616 aa36.81■■■■□ 3.48
SSSCA1-205ENST00000527920 TOB1P50616 345 aaPredicted RBP36.81■■■■□ 3.48
SSSCA1-205ENST00000527920 FXR2P51116 673 aaKnown RBP eCLIP36.81■■■■□ 3.48
SSSCA1-205ENST00000527920 CATSPER4Q7RTX7 472 aa36.81■■■■□ 3.48
SSSCA1-205ENST00000527920 BMP2KQ9NSY1 1161 aaPredicted RBP36.81■■■■□ 3.48
SSSCA1-205ENST00000527920 FNDC1Q4ZHG4 1894 aaPredicted RBP36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 SKIP12755 728 aa36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 MUTP22033 750 aa36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 GJB2P29033 226 aa36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 POU5F1BQ06416 359 aa36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 PCBP1Q15365 356 aaKnown RBP eCLIP36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 CSPP1Q1MSJ5 1256 aa36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 CASD1Q96PB1 797 aa36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 AGPAT5Q9NUQ2 364 aa36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 DBR1Q9UK59 544 aaKnown RBP36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 PIN4Q9Y237 131 aaKnown RBP36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 ZSCAN21Q9Y5A6 473 aaPredicted RBP36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 PCDHB12Q9Y5F1 795 aa36.8■■■■□ 3.48
SSSCA1-205ENST00000527920 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 LAD1O00515 517 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 MED24O75448 989 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 ITGB1P05556 798 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 SRGAP2CP0DJJ0 459 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 ATF7P17544 494 aaPredicted RBP36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 COL19A1Q14993 1142 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 ABI1Q8IZP0 508 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 KLHL23Q8NBE8 558 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 RNF149Q8NC42 400 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 PIGOQ8TEQ8 1089 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 NACC1Q96RE7 527 aa36.79■■■■□ 3.48
SSSCA1-205ENST00000527920 PHKA2P46019 1235 aa36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 RAB27AP51159 221 aa36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 NBR1Q14596 966 aa36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 TCEAL5Q5H9L2 206 aa36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 HAUS3Q68CZ6 603 aa36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 TWF2Q6IBS0 349 aaKnown RBP36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 IFNLR1Q8IU57 520 aaPredicted RBP36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 LRRC43Q8N309 656 aa36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 BACH2Q9BYV9 841 aa36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 UBE2ZQ9H832 354 aaPredicted RBP36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 TYW1Q9NV66 732 aaKnown RBP36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 SMC3Q9UQE7 1217 aa36.78■■■■□ 3.48
SSSCA1-205ENST00000527920 BMP1P13497 986 aa36.77■■■■□ 3.48
SSSCA1-205ENST00000527920 LAG3P18627 525 aa36.77■■■■□ 3.48
SSSCA1-205ENST00000527920 PDIA5Q14554 519 aa36.77■■■■□ 3.48
SSSCA1-205ENST00000527920 SPPL3Q8TCT6 385 aa36.77■■■■□ 3.48
SSSCA1-205ENST00000527920 CWH43Q9H720 699 aa36.77■■■■□ 3.48
SSSCA1-205ENST00000527920 ALG13Q9NP73 1137 aaKnown RBP36.77■■■■□ 3.48
SSSCA1-205ENST00000527920 PCDHB6Q9Y5E3 794 aa36.77■■■■□ 3.48
SSSCA1-205ENST00000527920 KIAA1671Q9BY89 1806 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 NCK2O43639 380 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 ZNF623O75123 536 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 ARL2P36404 184 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 UBE3AQ05086 875 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 CAMK1Q14012 370 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 TFDP1Q14186 410 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 RILPL1Q5EBL4 403 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 CLLU1OSQ5K130 101 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 SPOUT1Q5T280 376 aaKnown RBP36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 MINDY3Q9H8M7 445 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 STK24Q9Y6E0 443 aa36.76■■■■□ 3.48
SSSCA1-205ENST00000527920 PRPHP41219 470 aa36.75■■■■□ 3.47
SSSCA1-205ENST00000527920 PTENP60484 403 aa36.75■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms