RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 FPGT-TNNI3KV9GXZ4 949 aa8.15□□□□□ -1.1
VPS26B-204ENST00000527586 LAMA4Q16363 1823 aa8.15□□□□□ -1.11
VPS26B-204ENST00000527586 F5P12259 2224 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 PCNX2A6NKB5 2137 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 CCDC171Q6TFL3 1326 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 SALL3Q9BXA9 1300 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 LOXHD1Q8IVV2 1947 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 TEX51A0A1B0GUA7 166 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 NOP56O00567 594 aaKnown RBP8.14□□□□□ -1.11
VPS26B-204ENST00000527586 HOXA2O43364 376 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 SSBP05455 408 aaKnown RBP eCLIP8.14□□□□□ -1.11
VPS26B-204ENST00000527586 EIF2AK2P19525 551 aaKnown RBP8.14□□□□□ -1.11
VPS26B-204ENST00000527586 UBA1P22314 1058 aaKnown RBP8.14□□□□□ -1.11
VPS26B-204ENST00000527586 PXNP49023 591 aaPredicted RBP8.14□□□□□ -1.11
VPS26B-204ENST00000527586 UTP14CQ5TAP6 766 aaKnown RBP8.14□□□□□ -1.11
VPS26B-204ENST00000527586 TMEM173Q86WV6 379 aaPredicted RBP8.14□□□□□ -1.11
VPS26B-204ENST00000527586 ADAMTS14Q8WXS8 1223 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 RMDN3Q96TC7 470 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 TRIM4Q9C037 500 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 NT5C3AQ9H0P0 336 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 ELAC1Q9H777 363 aaKnown RBP8.14□□□□□ -1.11
VPS26B-204ENST00000527586 DPP7Q9UHL4 492 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 TUBE1Q9UJT0 475 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 ZNF215Q9UL58 517 aaPredicted RBP8.14□□□□□ -1.11
VPS26B-204ENST00000527586 HDAC5Q9UQL6 1122 aa8.14□□□□□ -1.11
VPS26B-204ENST00000527586 PATE3B3GLJ2 98 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 MBD4O95243 580 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 IRX4P78413 519 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 FAM189BP81408 668 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 PPFIA1Q13136 1202 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 PTGDRQ13258 359 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 SERINC3Q13530 473 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 ARHGEF16Q5VV41 709 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 TTBK2Q6IQ55 1244 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 GPR155Q7Z3F1 870 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 ZNF444Q8N0Y2 327 aaPredicted RBP8.13□□□□□ -1.11
VPS26B-204ENST00000527586 PNPLA1Q8N8W4 532 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 SYTL5Q8TDW5 730 aaPredicted RBP8.13□□□□□ -1.11
VPS26B-204ENST00000527586 TBC1D5Q92609 795 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 ZBTB10Q96DT7 871 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 CELF4Q9BZC1 486 aaKnown RBP8.13□□□□□ -1.11
VPS26B-204ENST00000527586 SEMA4CQ9C0C4 833 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 DUSP15Q9H1R2 295 aaPredicted RBP8.13□□□□□ -1.11
VPS26B-204ENST00000527586 RBM12Q9NTZ6 932 aaKnown RBP8.13□□□□□ -1.11
VPS26B-204ENST00000527586 COL20A1Q9P218 1284 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 MTMR7Q9Y216 660 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 GREB1LQ9C091 1923 aaPredicted RBP8.13□□□□□ -1.11
VPS26B-204ENST00000527586 MYH15Q9Y2K3 1946 aa8.13□□□□□ -1.11
VPS26B-204ENST00000527586 ASCC3Q8N3C0 2202 aaKnown RBP8.13□□□□□ -1.11
VPS26B-204ENST00000527586 PTPRCP08575 1304 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 POLQO75417 2590 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 MBLAC1A4D2B0 266 aaPredicted RBP8.12□□□□□ -1.11
VPS26B-204ENST00000527586 ERVH48-1M5A8F1 160 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 MEFVO15553 781 aaPredicted RBP8.12□□□□□ -1.11
VPS26B-204ENST00000527586 PRDM1O75626 825 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 AKAP3O75969 853 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 RHOBTB1O94844 696 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 CFBP00751 764 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 NR3C2P08235 984 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 SPATA31D3P0C874 917 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 C6P13671 934 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 MAPK8P45983 427 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 SEMA3BQ13214 749 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 LY6DQ14210 128 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 ELF2Q15723 593 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 GRIK4Q16099 956 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 CCDC96Q2M329 555 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 MARCH8Q5T0T0 291 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 KCNV1Q6PIU1 500 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 Q6ZS52 159 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 SPATA31D4Q6ZUB0 917 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 PRICKLE2Q7Z3G6 844 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 KRT25Q7Z3Z0 450 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 FMNL3Q8IVF7 1028 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 MRPL50Q8N5N7 158 aaKnown RBP8.12□□□□□ -1.11
VPS26B-204ENST00000527586 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 BCL7CQ8WUZ0 217 aaPredicted RBP8.12□□□□□ -1.11
VPS26B-204ENST00000527586 DNASE1L2Q92874 299 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 FGF13Q92913 245 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 IGSF21Q96ID5 467 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 PRKD2Q9BZL6 878 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 PLA2G2FQ9BZM2 168 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 SMC4Q9NTJ3 1288 aa8.12□□□□□ -1.11
VPS26B-204ENST00000527586 TLR7Q9NYK1 1049 aaKnown RBP8.12□□□□□ -1.11
VPS26B-204ENST00000527586 DBNLQ9UJU6 430 aaKnown RBP8.12□□□□□ -1.11
VPS26B-204ENST00000527586 LRRK2Q5S007 2527 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 SETD2Q9BYW2 2564 aaPredicted RBP8.11□□□□□ -1.11
VPS26B-204ENST00000527586 CCDC194A0A1B0GVG4 234 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 UPK3BL1B0FP48 263 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 UPK3BL2E5RIL1 263 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 RPS6KA5O75582 802 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 GLUD1P00367 558 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 RPLP2P05387 115 aaKnown RBP8.11□□□□□ -1.11
VPS26B-204ENST00000527586 NTHL1P78549 312 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 LRRC32Q14392 662 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 KRTAP21-3Q3LHN1 58 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 GRASPQ7Z6J2 395 aaPredicted RBP8.11□□□□□ -1.11
VPS26B-204ENST00000527586 PLEKHM2Q8IWE5 1019 aa8.11□□□□□ -1.11
VPS26B-204ENST00000527586 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms