RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 PDE1AP54750 535 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 SNAP25P60880 206 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 ITGB3BPQ13352 177 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-216ENST00000527467 DOK7Q18PE1 504 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 RGMBQ6NW40 437 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 PPP4R3CPQ6ZMV5 832 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 TADA1Q96BN2 335 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 LRRC39Q96DD0 335 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 CAPNS2Q96L46 248 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 MED10Q9BTT4 135 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 RPAP3Q9H6T3 665 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-216ENST00000527467 MRPL44Q9H9J2 332 aaKnown RBP7.72□□□□□ -1.17
CTNND1-216ENST00000527467 CREBZFQ9NS37 354 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 EPN1Q9Y6I3 576 aaPredicted RBP7.72□□□□□ -1.17
CTNND1-216ENST00000527467 STON1Q9Y6Q2 735 aa7.72□□□□□ -1.17
CTNND1-216ENST00000527467 SYNDIG1LA6NDD5 238 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 GOLGA8JA6NMD2 632 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 TBKBP1A7MCY6 615 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 GOLGA8TH3BQL2 631 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 CLASP2O75122 1294 aaKnown RBP7.71□□□□□ -1.17
CTNND1-216ENST00000527467 MOCS3O95396 460 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 IL15P40933 162 aaPredicted RBP7.71□□□□□ -1.17
CTNND1-216ENST00000527467 KRT76Q01546 638 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 KRT72Q14CN4 511 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 FAM178BQ8IXR5 827 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 ETNK1Q9HBU6 452 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 TUFT1Q9NNX1 390 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 RTEL1Q9NZ71 1219 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 ATP10DQ9P241 1426 aa7.71□□□□□ -1.17
CTNND1-216ENST00000527467 KCNJ18B7U540 433 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 MYO1FO00160 1098 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 TRIM13O60858 407 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 GUCA1CO95843 209 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 SOX5P35711 763 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 PPARGP37231 505 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-216ENST00000527467 MECOMQ03112 1051 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 LAMB3Q13751 1172 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 KCNJ12Q14500 433 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 INPP5AQ14642 412 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 SGO2Q562F6 1265 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 BEND6Q5SZJ8 279 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-216ENST00000527467 ARMC3Q5W041 872 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 FAM45BPQ6NSW5 357 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 TMEM154Q6P9G4 183 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 NANOGNBQ7Z5D8 188 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 PBXIP1Q96AQ6 731 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 C1orf112Q9NSG2 853 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 USE1Q9NZ43 259 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 PKD2L1Q9P0L9 805 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 TBC1D4O60343 1298 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 ECE2O60344 883 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 FAM107AO95990 144 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 PLS3P13797 630 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 ITGAXP20702 1163 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 TXKP42681 527 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 NR1H3Q13133 447 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 KCTD2Q14681 263 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 CASP8Q14790 479 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 MAPRE2Q15555 327 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 TRIP4Q15650 581 aaPredicted RBP7.71□□□□□ -1.18
CTNND1-216ENST00000527467 HABP4Q5JVS0 413 aaKnown RBP7.71□□□□□ -1.18
CTNND1-216ENST00000527467 TTC38Q5R3I4 469 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 SLC9C2Q5TAH2 1124 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 CREB3L3Q68CJ9 461 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 LINS1Q8NG48 757 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 DEPDC1BQ8WUY9 529 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 NARS2Q96I59 477 aaKnown RBP7.71□□□□□ -1.18
CTNND1-216ENST00000527467 TESK2Q96S53 571 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 ZMYND12Q9H0C1 365 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 UBXN8O00124 270 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 COPEO14579 308 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 RALBP11234 206 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 CCT3P49368 545 aaKnown RBP7.71□□□□□ -1.18
CTNND1-216ENST00000527467 NUP107P57740 925 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 NEK8Q86SG6 692 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 ZBTB33Q86T24 672 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 LRRC8AQ8IWT6 810 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 ANKRD13AQ8IZ07 590 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 STAG2Q8N3U4 1231 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 ATP8B4Q8TF62 1192 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 OTULINQ96BN8 352 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 TRIM11Q96F44 468 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 LLPHQ9BRT6 129 aaKnown RBP7.71□□□□□ -1.18
CTNND1-216ENST00000527467 ECT2Q9H8V3 914 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 ABCF3Q9NUQ8 709 aa7.71□□□□□ -1.18
CTNND1-216ENST00000527467 MAGEB6P1A0A0J9YX57 407 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 ZNF839A8K0R7 811 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 ANKRD65E5RJM6 399 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 CCNT1O60563 726 aaKnown RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 TPP2P29144 1249 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 IL12RB1P42701 662 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 PTPROQ16827 1216 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 ARMCX4Q5H9R4 360 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 EMBQ6PCB8 327 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 OLFML1Q6UWY5 402 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 CTU1Q7Z7A3 348 aaKnown RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 STX12Q86Y82 276 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 BBS7Q8IWZ6 715 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 SIX5Q8N196 739 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 CHMP2BQ9UQN3 213 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms