RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 EEPD1Q7L9B9 569 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 UPF1Q92900 1129 aaKnown RBP eCLIP10.69□□□□□ -0.7
USP35-201ENST00000526425 TEKT3Q9BXF9 490 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 EHD2Q9NZN4 543 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 RNF181Q9P0P0 153 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 PCDHA13Q9Y5I0 950 aa10.69□□□□□ -0.7
USP35-201ENST00000526425 BZW2Q9Y6E2 419 aaKnown RBP10.69□□□□□ -0.7
USP35-201ENST00000526425 ANKRD33BA6NCL7 494 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 M0R2N6 131 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 KCNA1Q09470 495 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 AP3B2Q13367 1082 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 PPP1R18Q6NYC8 613 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 KCNV2Q8TDN2 545 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 GOLPH3Q9H4A6 298 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 HACL1Q9UJ83 578 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 GFPT2O94808 682 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 NAT1P18440 290 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 USP11P51784 963 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 MAP3K9P80192 1104 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 RRP1BQ14684 758 aaKnown RBP10.68□□□□□ -0.7
USP35-201ENST00000526425 GPR162Q16538 588 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 ANGEL2Q5VTE6 544 aaKnown RBP10.68□□□□□ -0.7
USP35-201ENST00000526425 PPP4R3AQ6IN85 833 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 TATDN1Q6P1N9 297 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 STXBP4Q6ZWJ1 553 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 APTXQ7Z2E3 356 aaKnown RBP10.68□□□□□ -0.7
USP35-201ENST00000526425 TIAM2Q8IVF5 1701 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 TMCO5AQ8N6Q1 288 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 NOA1Q8NC60 698 aaKnown RBP10.68□□□□□ -0.7
USP35-201ENST00000526425 RUSC1Q9BVN2 902 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 MYO1AQ9UBC5 1043 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 TMEM150BA6NC51 233 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 IPO5O00410 1097 aaKnown RBP10.68□□□□□ -0.7
USP35-201ENST00000526425 EML1O00423 815 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 MEIS2O14770 477 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 FAM163BP0C2L3 166 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 ARP10275 920 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 SLC9A1P19634 815 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 CASP5P51878 434 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 MTMR2Q13614 643 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 WHAMMP3Q1A5X7 153 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 FKBP1CQ5VVH2 108 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 NAA35Q5VZE5 725 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 DPY19L2Q6NUT2 758 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 GJB7Q6PEY0 223 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 SULF1Q8IWU6 871 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 FAM81AQ8TBF8 368 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 SNRNP27Q8WVK2 155 aaKnown RBP10.68□□□□□ -0.7
USP35-201ENST00000526425 WRNIP1Q96S55 665 aa10.68□□□□□ -0.7
USP35-201ENST00000526425 MEFVO15553 781 aaPredicted RBP10.67□□□□□ -0.7
USP35-201ENST00000526425 ZBED4O75132 1171 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 LMNB1P20700 586 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 HPDP32754 393 aaPredicted RBP10.67□□□□□ -0.7
USP35-201ENST00000526425 CAP2P40123 477 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 CASP4P49662 377 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 CKAP4Q07065 602 aaKnown RBP10.67□□□□□ -0.7
USP35-201ENST00000526425 KBTBD12Q3ZCT8 623 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 IQCEQ6IPM2 695 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 NFRKBQ6P4R8 1299 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 FAM186BQ8IYM0 893 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 TRIM11Q96F44 468 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 NOX5Q96PH1 765 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
USP35-201ENST00000526425 GMLQ99445 158 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 PAGR1Q9BTK6 254 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 GCNT4Q9P109 453 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 HYOU1Q9Y4L1 999 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 KCNJ6P48051 423 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 LMBRD2Q68DH5 695 aaPredicted RBP10.67□□□□□ -0.7
USP35-201ENST00000526425 CCDC13Q8IYE1 715 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 TRIM31Q9BZY9 425 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 FHDC1Q9C0D6 1143 aaPredicted RBP10.67□□□□□ -0.7
USP35-201ENST00000526425 PLIN4Q96Q06 1357 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 IGKV6D-41A0A0C4DH26 115 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 E7EVH7 732 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 NFIBO00712 420 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 CEP104O60308 925 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 DIAPH2O60879 1101 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 RTN2O75298 545 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 RTN3O95197 1032 aaPredicted RBP10.67□□□□□ -0.7
USP35-201ENST00000526425 RNF168Q8IYW5 571 aaPredicted RBP10.67□□□□□ -0.7
USP35-201ENST00000526425 VCPKMTQ9H867 229 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 GGA3Q9NZ52 723 aa10.67□□□□□ -0.7
USP35-201ENST00000526425 NR3C1P04150 777 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 SEC24CP53992 1094 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 CEP55Q53EZ4 464 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 CENPPQ6IPU0 288 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 APOBEC3FQ8IUX4 373 aaKnown RBP10.66□□□□□ -0.7
USP35-201ENST00000526425 MKL1Q969V6 931 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 ELMO3Q96BJ8 720 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 DCPSQ96C86 337 aaKnown RBP10.66□□□□□ -0.7
USP35-201ENST00000526425 LXNQ9BS40 222 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 UBXN6Q9BZV1 441 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 PARVGQ9HBI0 331 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 AS3MTQ9HBK9 375 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 ZHX2Q9Y6X8 837 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 ITIH6Q6UXX5 1313 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 A0A1W2PQC6 194 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 HERVK_113P62684 666 aa10.66□□□□□ -0.7
USP35-201ENST00000526425 KNOP1Q1ED39 458 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms