RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 CATSPER3Q86XQ3 398 aa14.99□□□□□ -0.01
USH1C-203ENST00000526181 C4orf32Q8N8J7 132 aa14.99□□□□□ -0.01
USH1C-203ENST00000526181 KLHL23Q8NBE8 558 aa14.99□□□□□ -0.01
USH1C-203ENST00000526181 PSPC1Q8WXF1 523 aaKnown RBP14.99□□□□□ -0.01
USH1C-203ENST00000526181 CASD1Q96PB1 797 aa14.99□□□□□ -0.01
USH1C-203ENST00000526181 MTRQ99707 1265 aa14.99□□□□□ -0.01
USH1C-203ENST00000526181 MINDY3Q9H8M7 445 aa14.99□□□□□ -0.01
USH1C-203ENST00000526181 TYW1Q9NV66 732 aaKnown RBP14.99□□□□□ -0.01
USH1C-203ENST00000526181 NOL7Q9UMY1 257 aaKnown RBP14.99□□□□□ -0.01
USH1C-203ENST00000526181 COG5Q9UP83 839 aa14.99□□□□□ -0.01
USH1C-203ENST00000526181 PLAGL2Q9UPG8 496 aa14.99□□□□□ -0.01
USH1C-203ENST00000526181 PIN4Q9Y237 131 aaKnown RBP14.99□□□□□ -0.01
USH1C-203ENST00000526181 PCDHB6Q9Y5E3 794 aa14.99□□□□□ -0.01
USH1C-203ENST00000526181 A0A0U1RQF3 1178 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 ITGB1P05556 798 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 RARRES1P49788 294 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 ORC2Q13416 577 aaPredicted RBP14.98□□□□□ -0.01
USH1C-203ENST00000526181 LONRF3Q496Y0 759 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 CLLU1OSQ5K130 101 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 SPOUT1Q5T280 376 aaKnown RBP14.98□□□□□ -0.01
USH1C-203ENST00000526181 LRRC55Q6ZSA7 311 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 CATSPER4Q7RTX7 472 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 ZNF598Q86UK7 904 aaKnown RBP14.98□□□□□ -0.01
USH1C-203ENST00000526181 FERMT3Q86UX7 667 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 EXOC8Q8IYI6 725 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 ASAP3Q8TDY4 903 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 ADAMTS19Q8TE59 1207 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 SYMPKQ92797 1274 aaKnown RBP14.98□□□□□ -0.01
USH1C-203ENST00000526181 P2RX5Q93086 422 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 NECAB3Q96P71 396 aaPredicted RBP14.98□□□□□ -0.01
USH1C-203ENST00000526181 PLVAPQ9BX97 442 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 NSUN3Q9H649 340 aaKnown RBP14.98□□□□□ -0.01
USH1C-203ENST00000526181 CWH43Q9H720 699 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 ANKEF1Q9NU02 776 aa14.98□□□□□ -0.01
USH1C-203ENST00000526181 BMP1P13497 986 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 IRS1P35568 1242 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 TRAPPC10P48553 1259 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 POTEGQ6S5H5 508 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 RNF149Q8NC42 400 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 SPPL3Q8TCT6 385 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 TCP11Q8WWU5 503 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 INO80BQ9C086 356 aaPredicted RBP14.97□□□□□ -0.01
USH1C-203ENST00000526181 TMEM117Q9H0C3 514 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 UBE2ZQ9H832 354 aaPredicted RBP14.97□□□□□ -0.01
USH1C-203ENST00000526181 CHST12Q9NRB3 414 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 RNF216Q9NWF9 866 aaPredicted RBP14.97□□□□□ -0.01
USH1C-203ENST00000526181 PCDHGC5Q9Y5F6 944 aa14.97□□□□□ -0.01
USH1C-203ENST00000526181 ATG2AQ2TAZ0 1938 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.96□□□□□ -0.01
USH1C-203ENST00000526181 XIRP2A4UGR9 3374 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 MEIS3P2A8K0S8 358 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 GAS2O43903 313 aaKnown RBP14.96□□□□□ -0.01
USH1C-203ENST00000526181 USO1O60763 962 aaKnown RBP14.96□□□□□ -0.01
USH1C-203ENST00000526181 DGAT1O75907 488 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 GTF2F1P35269 517 aaKnown RBP eCLIP14.96□□□□□ -0.01
USH1C-203ENST00000526181 PBX3P40426 434 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 PHKA2P46019 1235 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 MCM2P49736 904 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 CAPSQ13938 189 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 AAK1Q2M2I8 961 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 MCTP1Q6DN14 999 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 TWF2Q6IBS0 349 aaKnown RBP14.96□□□□□ -0.01
USH1C-203ENST00000526181 MAEAQ7L5Y9 396 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 COLGALT1Q8NBJ5 622 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 IL27Q8NEV9 243 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 HELQQ8TDG4 1101 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 POF1BQ8WVV4 589 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 LPPQ93052 612 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 CCDC43Q96MW1 224 aaKnown RBP14.96□□□□□ -0.01
USH1C-203ENST00000526181 POLR3CQ9BUI4 534 aaPredicted RBP14.96□□□□□ -0.01
USH1C-203ENST00000526181 LMAN2LQ9H0V9 348 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 TUFT1Q9NNX1 390 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 GPRC5CQ9NQ84 441 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 AGPAT5Q9NUQ2 364 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 DACT1Q9NYF0 836 aa14.96□□□□□ -0.01
USH1C-203ENST00000526181 PRRC2BQ5JSZ5 2229 aaKnown RBP14.96□□□□□ -0.02
USH1C-203ENST00000526181 FNDC1Q4ZHG4 1894 aaPredicted RBP14.95□□□□□ -0.02
USH1C-203ENST00000526181 HOXA2O43364 376 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 KCNA5P22460 613 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 GLRA2P23416 452 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 ARL2P36404 184 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 HYAL1Q12794 435 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 PTGDRQ13258 359 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 IL17AQ16552 155 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 ECM1Q16610 540 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 NAALADL2Q58DX5 795 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 SRGAP1Q7Z6B7 1085 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 ADGRD2Q7Z7M1 963 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 ABI1Q8IZP0 508 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 LRRC43Q8N309 656 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 BACH2Q9BYV9 841 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 POLR3FQ9H1D9 316 aaPredicted RBP14.95□□□□□ -0.02
USH1C-203ENST00000526181 FAM105AQ9NUU6 356 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 SMC3Q9UQE7 1217 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 KIF3AQ9Y496 699 aa14.95□□□□□ -0.02
USH1C-203ENST00000526181 SPTBN5Q9NRC6 3674 aaKnown RBP14.94□□□□□ -0.02
USH1C-203ENST00000526181 PP2D1A8MPX8 630 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 H3BQ06 376 aaPredicted RBP14.94□□□□□ -0.02
USH1C-203ENST00000526181 ASAP2O43150 1006 aa14.94□□□□□ -0.02
USH1C-203ENST00000526181 TSPAN1O60635 241 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms