RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 MYH4Q9Y623 1939 aa6.8□□□□□ -1.32
CCDC90B-204ENST00000525504 NFASCO94856 1347 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 SCN10AQ9Y5Y9 1956 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 FRMPD3Q5JV73 1810 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 IGKV6D-21A0A0A0MT36 114 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 KLF18A0A0U1RQI7 1052 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 SMCO2A6NFE2 343 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 EPOPA6NHQ4 379 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 PRPF3O43395 683 aaKnown RBP6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 SORBS3O60504 671 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 CHRNA1P02708 482 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 RPLP2P05387 115 aaKnown RBP6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 RPS6KB1P23443 525 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 CIITAP33076 1130 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 KCNJ6P48051 423 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 ERVK-21P61565 698 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 DEFB103AP81534 67 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 HTRA4P83105 476 aaPredicted RBP6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 ITGB3BPQ13352 177 aaPredicted RBP6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 PKN1Q16512 942 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 PFKFB3Q16875 520 aaPredicted RBP6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 MARCH8Q5T0T0 291 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 MCTP2Q6DN12 878 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.79□□□□□ -1.322e-8■■■■■ 27.1
CCDC90B-204ENST00000525504 PLPPR4Q7Z2D5 763 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 TRIM50Q86XT4 487 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 LMBR1Q8WVP7 490 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 SEPT8Q92599 483 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 TOP1MTQ969P6 601 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 OSBPL7Q9BZF2 842 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 SMARCAD1Q9H4L7 1026 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 AGO4Q9HCK5 861 aaKnown RBP6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 ERAP1Q9NZ08 941 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 LMCD1Q9NZU5 365 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 ZNF215Q9UL58 517 aaPredicted RBP6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 MTCH2Q9Y6C9 303 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 MYH8P13535 1937 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 NCOR1O75376 2440 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 NID2Q14112 1375 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 TRANK1O15050 2925 aa6.79□□□□□ -1.32
CCDC90B-204ENST00000525504 EYSQ5T1H1 3165 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 LCHNA4D1U4 455 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 RRN3P2A6NIE6 340 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 GOLGA8AA7E2F4 631 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 GOLGA8BA8MQT2 603 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 FAM86B1E9PN63 330 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 DHX15O43143 795 aaKnown RBP6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 EDIL3O43854 480 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 REC8O95072 547 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 FAM86B2P0C5J1 330 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 ARP10275 920 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 SCG2P13521 617 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 CPA1P15085 419 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 IFNAR1P17181 557 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 PSMA5P28066 241 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 ADH6P28332 368 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 PDIA3P30101 505 aaKnown RBP6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 TCF7P36402 384 aaPredicted RBP6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 SLC26A2P50443 739 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 METAP2P50579 478 aaKnown RBP eCLIP6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 ADCY7P51828 1080 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 NAPAP54920 295 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 ACTR2P61160 394 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 ARHGAP4P98171 946 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 MGAT3Q09327 533 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 PPFIA1Q13136 1202 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 EFHC2Q5JST6 749 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 UTP14CQ5TAP6 766 aaKnown RBP6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 BLOC1S2Q6QNY1 142 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 Q6ZUG5 572 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 PGBD3Q8N328 593 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 TNPO1Q92973 898 aaKnown RBP6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 JAKMIP1Q96N16 626 aaKnown RBP6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 ASB2Q96Q27 587 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 ANO3Q9BYT9 981 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 TM6SF1Q9BZW5 370 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 SUGCTQ9HAC7 445 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 JPH1Q9HDC5 661 aaPredicted RBP6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 PRDM6Q9NQX0 595 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 SLC9A2Q9UBY0 812 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 INSL6Q9Y581 213 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 SQORQ9Y6N5 450 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 LRRC37A2A6NM11 1700 aa6.78□□□□□ -1.32
CCDC90B-204ENST00000525504 PLXNA1Q9UIW2 1896 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 IGLV3-22A0A075B6J6 115 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 LINC01553A4QN01 128 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 RFXAPO00287 272 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 ENPP3O14638 875 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 ADAMTS3O15072 1205 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 BNIP3LO60238 219 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 CCNE2O96020 404 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 AMHP03971 560 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 INSRRP14616 1297 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 IGFBP4P22692 258 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 GNA11P29992 359 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 STAT5BP51692 787 aa6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 MRPS5P82675 430 aaKnown RBP6.77□□□□□ -1.33
CCDC90B-204ENST00000525504 APOBRQ0VD83 1088 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms