RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 TBK1Q9UHD2 729 aa12.14□□□□□ -0.47
CLNS1A-204ENST00000525428 INTUQ9ULD6 942 aa12.14□□□□□ -0.47
CLNS1A-204ENST00000525428 CYP2D7A0A087X1C5 515 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 NOL4O94818 638 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 ACSL3O95573 720 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 SPATA31D3P0C874 917 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 RASA1P20936 1047 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 AUHQ13825 339 aaKnown RBP12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 INF2Q27J81 1249 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 SPATA31D4Q6ZUB0 917 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 TRIM42Q8IWZ5 723 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 SCG3Q8WXD2 468 aaKnown RBP12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 ANKRD27Q96NW4 1050 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 PHACTR1Q9C0D0 580 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 SLITRK6Q9H5Y7 841 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 ZWILCHQ9H900 591 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 FAM205AQ6ZU69 1335 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 ABLIM1O14639 778 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 GJB6O95452 261 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 NUDT17P0C025 328 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 KHDC1Q4VXA5 237 aaKnown RBP12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 SLC27A3Q5K4L6 730 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 SNX30Q5VWJ9 437 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 RBM12BQ8IXT5 1001 aaKnown RBP12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 C4orf32Q8N8J7 132 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 FAM136AQ96C01 138 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 CRAMP1Q96RY5 1269 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 NACAP1Q9BZK3 213 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 CUEDC2Q9H467 287 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 ERVK-5Q9HDB9 667 aa12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 DNAJC17Q9NVM6 304 aaKnown RBP12.13□□□□□ -0.47
CLNS1A-204ENST00000525428 HNRNPRO43390 633 aaKnown RBP12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CCNB1P14635 433 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 STX2P32856 288 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 USP46P62068 366 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 ASIC2Q16515 512 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CERKLQ49MI3 558 aaPredicted RBP12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 GALNT17Q6IS24 598 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 IRGCQ6NXR0 463 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CABP7Q86V35 215 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 IQCDQ96DY2 449 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 IFT43Q96FT9 208 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 RBM17Q96I25 401 aaKnown RBP12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 DYDC2Q96IM9 177 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 ZNF333Q96JL9 665 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 ERP44Q9BS26 406 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 TXLNGYQ9BZA5 131 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CCDC134Q9H6E4 229 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 DMAP1Q9NPF5 467 aaPredicted RBP12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 ZDHHC18Q9NUE0 388 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 TXLNGQ9NUQ3 528 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 RPTORQ8N122 1335 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 NMT2O60551 498 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 WFS1O76024 890 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 ACTN1P12814 892 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 SETDB1Q15047 1291 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 RCN1Q15293 331 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 LLGL1Q15334 1064 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CCDC152Q4G0S7 254 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 ARL6IP4Q66PJ3 421 aaKnown RBP12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CGB2Q6NT52 195 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 AADACL2Q6P093 401 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 RFWD3Q6PCD5 774 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 RFX8Q6ZV50 586 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CEP72Q9P209 647 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 PTPN22Q9Y2R2 807 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 TRAF5O00463 557 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 SKIP12755 728 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 PLCG2P16885 1265 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 INHBCP55103 352 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 KLRC3Q07444 240 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 MTA1Q13330 715 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 MPP2Q14168 576 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CEP128Q6ZU80 1094 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 LRRC57Q8N9N7 239 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 PITPNM3Q9BZ71 974 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 PHF24Q9UPV7 400 aa12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLNS1A-204ENST00000525428 CCDC194A0A1B0GVG4 234 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 FAM200BP0CF97 657 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 CNPY1Q3B7I2 92 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 CENPPQ6IPU0 288 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 ALKBH5Q6P6C2 394 aaKnown RBP12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 TPCN2Q8NHX9 752 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 C18orf8Q96DM3 657 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 TRAPPC9Q96Q05 1148 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 YIPF2Q9BWQ6 316 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 CARD9Q9H257 536 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 TCP11L1Q9NUJ3 509 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 TBC1D7Q9P0N9 293 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 CTTNBP2NLQ9P2B4 639 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 LRCH1Q9Y2L9 728 aa12.11□□□□□ -0.47
CLNS1A-204ENST00000525428 COL4A1P02462 1669 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms