RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 DACT1Q9NYF0 836 aa26.99■■□□□ 1.91
USP47-205ENST00000525257 TMEM150BA6NC51 233 aa26.98■■□□□ 1.91
USP47-205ENST00000525257 IFNAR1P17181 557 aa26.98■■□□□ 1.91
USP47-205ENST00000525257 RPS6KB1P23443 525 aa26.98■■□□□ 1.91
USP47-205ENST00000525257 USP11P51784 963 aa26.98■■□□□ 1.91
USP47-205ENST00000525257 BCAR1P56945 870 aa26.98■■□□□ 1.91
USP47-205ENST00000525257 CCT2P78371 535 aaKnown RBP26.98■■□□□ 1.91
USP47-205ENST00000525257 TARBP2Q15633 366 aaKnown RBP26.98■■□□□ 1.91
USP47-205ENST00000525257 GCOM2Q9BZD3 368 aaPredicted RBP26.98■■□□□ 1.91
USP47-205ENST00000525257 NR2E1Q9Y466 385 aa26.98■■□□□ 1.91
USP47-205ENST00000525257 CLASP2O75122 1294 aaKnown RBP26.97■■□□□ 1.91
USP47-205ENST00000525257 HSPA4P34932 840 aa26.97■■□□□ 1.91
USP47-205ENST00000525257 ALDH7A1P49419 539 aaKnown RBP26.97■■□□□ 1.91
USP47-205ENST00000525257 NLRP5P59047 1200 aa26.97■■□□□ 1.91
USP47-205ENST00000525257 CES5AQ6NT32 575 aa26.97■■□□□ 1.91
USP47-205ENST00000525257 MIER3Q7Z3K6 550 aa26.97■■□□□ 1.91
USP47-205ENST00000525257 TBCKQ8TEA7 893 aa26.97■■□□□ 1.91
USP47-205ENST00000525257 SH2D3AQ9BRG2 576 aa26.97■■□□□ 1.91
USP47-205ENST00000525257 AGXT2Q9BYV1 514 aa26.97■■□□□ 1.91
USP47-205ENST00000525257 POMKQ9H5K3 350 aa26.97■■□□□ 1.91
USP47-205ENST00000525257 PSMD10O75832 226 aa26.96■■□□□ 1.91
USP47-205ENST00000525257 PDGFBP01127 241 aaPredicted RBP26.96■■□□□ 1.91
USP47-205ENST00000525257 LONRF3Q496Y0 759 aa26.96■■□□□ 1.91
USP47-205ENST00000525257 FBXL16Q8N461 479 aa26.96■■□□□ 1.91
USP47-205ENST00000525257 KREMEN2Q8NCW0 462 aa26.96■■□□□ 1.91
USP47-205ENST00000525257 TMEM169Q96HH4 297 aa26.96■■□□□ 1.91
USP47-205ENST00000525257 ADAM7Q9H2U9 754 aa26.96■■□□□ 1.91
USP47-205ENST00000525257 FAM86C1Q9NVL1 165 aa26.96■■□□□ 1.91
USP47-205ENST00000525257 A0A087WZ62 844 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 C2CD4DB7Z1M9 353 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 ZC3H11AO75152 810 aaKnown RBP eCLIP26.95■■□□□ 1.9
USP47-205ENST00000525257 TDP2O95551 362 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 CXCL14O95715 111 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 AVPR2P30518 371 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 PHKA2P46019 1235 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 XKR3Q5GH77 459 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 RDM1Q8NG50 284 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 LPPQ93052 612 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 NECTIN4Q96NY8 510 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 FDXACB1Q9BRP7 624 aaPredicted RBP26.95■■□□□ 1.9
USP47-205ENST00000525257 NIFKQ9BYG3 293 aaKnown RBP26.95■■□□□ 1.9
USP47-205ENST00000525257 SH3GLB2Q9NR46 395 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 CHST12Q9NRB3 414 aa26.95■■□□□ 1.9
USP47-205ENST00000525257 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.94■■□□□ 1.9
USP47-205ENST00000525257 WEE2P0C1S8 567 aa26.94■■□□□ 1.9
USP47-205ENST00000525257 SFPQP23246 707 aaKnown RBP eCLIP26.94■■□□□ 1.9
USP47-205ENST00000525257 PDIA3P30101 505 aaKnown RBP26.94■■□□□ 1.9
USP47-205ENST00000525257 ITIH3Q06033 890 aa26.94■■□□□ 1.9
USP47-205ENST00000525257 Q4G0T1 1027 aa26.94■■□□□ 1.9
USP47-205ENST00000525257 TWF2Q6IBS0 349 aaKnown RBP26.94■■□□□ 1.9
USP47-205ENST00000525257 TMEM173Q86WV6 379 aaPredicted RBP26.94■■□□□ 1.9
USP47-205ENST00000525257 VPS52Q8N1B4 723 aa26.94■■□□□ 1.9
USP47-205ENST00000525257 AUTS2Q8WXX7 1259 aa26.94■■□□□ 1.9
USP47-205ENST00000525257 CEP89Q96ST8 783 aa26.94■■□□□ 1.9
USP47-205ENST00000525257 PIN4Q9Y237 131 aaKnown RBP26.94■■□□□ 1.9
USP47-205ENST00000525257 CACNA1HO95180 2353 aa26.94■■□□□ 1.9
USP47-205ENST00000525257 STBD1O95210 358 aa26.93■■□□□ 1.9
USP47-205ENST00000525257 DNM2P50570 870 aa26.93■■□□□ 1.9
USP47-205ENST00000525257 CDC42EP1Q00587 391 aa26.93■■□□□ 1.9
USP47-205ENST00000525257 BMS1Q14692 1282 aaKnown RBP26.93■■□□□ 1.9
USP47-205ENST00000525257 RARS2Q5T160 578 aaKnown RBP26.93■■□□□ 1.9
USP47-205ENST00000525257 C12orf76Q8N812 135 aaPredicted RBP26.93■■□□□ 1.9
USP47-205ENST00000525257 RIPOR3Q96MK2 946 aa26.93■■□□□ 1.9
USP47-205ENST00000525257 ZBP1Q9H171 429 aa26.93■■□□□ 1.9
USP47-205ENST00000525257 INPP5FQ9Y2H2 1132 aa26.93■■□□□ 1.9
USP47-205ENST00000525257 IGKV6-21A0A0C4DH24 114 aa26.92■■□□□ 1.9
USP47-205ENST00000525257 MTMR3Q13615 1198 aa26.92■■□□□ 1.9
USP47-205ENST00000525257 RHPN2Q8IUC4 686 aa26.92■■□□□ 1.9
USP47-205ENST00000525257 TMEM87AQ8NBN3 555 aa26.92■■□□□ 1.9
USP47-205ENST00000525257 SUCLA2Q9P2R7 463 aaPredicted RBP26.92■■□□□ 1.9
USP47-205ENST00000525257 PCDHA4Q9UN74 947 aa26.92■■□□□ 1.9
USP47-205ENST00000525257 SORCS3Q9UPU3 1222 aa26.92■■□□□ 1.9
USP47-205ENST00000525257 MYO10Q9HD67 2058 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 MEIS3P2A8K0S8 358 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 DDX11L8A8MPP1 907 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 BRD1O95696 1058 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 PSMA5P28066 241 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 MTHFRP42898 656 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 KANK3Q6NY19 840 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 B3GNT9Q6UX72 402 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 KSR1Q8IVT5 923 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 TRIM22Q8IYM9 498 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 TRAIPQ9BWF2 469 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 C22orf23Q9BZE7 217 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 TBC1D13Q9NVG8 400 aa26.91■■□□□ 1.9
USP47-205ENST00000525257 ZFHX2Q9C0A1 2572 aaPredicted RBP26.91■■□□□ 1.9
USP47-205ENST00000525257 CYP3A7-CYP3A51PA0A087WV96 503 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 EPCAMP16422 314 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 CYP3A7P24462 503 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 SSRP1Q08945 709 aaKnown RBP26.9■■□□□ 1.9
USP47-205ENST00000525257 GLB1LQ6UWU2 654 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 CATSPER4Q7RTX7 472 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 ZNF410Q86VK4 478 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 BCL7CQ8WUZ0 217 aaPredicted RBP26.9■■□□□ 1.9
USP47-205ENST00000525257 IGSF21Q96ID5 467 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 NLRP4Q96MN2 994 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 INO80BQ9C086 356 aaPredicted RBP26.9■■□□□ 1.9
USP47-205ENST00000525257 GBP3Q9H0R5 595 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 SMOC2Q9H3U7 446 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 NRDE2Q9H7Z3 1164 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms