RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 HOXA13P31271 388 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-202ENST00000524773 SLFN11Q7Z7L1 901 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 RPAINQ86UA6 219 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 NEK9Q8TD19 979 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 CCNL1Q9UK58 526 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-202ENST00000524773 DNAJC12Q9UKB3 198 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.25□□□□□ -0.13
CAPN1-202ENST00000524773 LAMB2P55268 1798 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 RHBDL3P58872 404 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 DRP2Q13474 957 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 IFI16Q16666 785 aaKnown RBP14.25□□□□□ -0.13
CAPN1-202ENST00000524773 DUPD1Q68J44 220 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-202ENST00000524773 PHLDB2Q86SQ0 1253 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 SEPT12Q8IYM1 358 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 ADAM33Q9BZ11 813 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 LRRC27Q9C0I9 530 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 DDX4Q9NQI0 724 aaKnown RBP14.25□□□□□ -0.13
CAPN1-202ENST00000524773 FAM114A2Q9NRY5 505 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 BTAF1O14981 1849 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 ROBO3Q96MS0 1386 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 TISP43B9A030 160 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 BHMG1C9JSJ3 638 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-202ENST00000524773 GNPATO15228 680 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 CALCAP01258 141 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 PAEPP09466 180 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 CACNB3P54284 484 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 SNX1Q13596 522 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 CTTNQ14247 550 aaKnown RBP14.25□□□□□ -0.13
CAPN1-202ENST00000524773 KIAA1755Q5JYT7 1200 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 DYDC1Q8WWB3 177 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 FAM118BQ9BPY3 351 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 SLITRK6Q9H5Y7 841 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 TBK1Q9UHD2 729 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 GGA2Q9UJY4 613 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 ZNF831Q5JPB2 1677 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 PNMA6FA0A0J9YX94 578 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 ESYT2A0FGR8 921 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 KIAA0391O15091 583 aaKnown RBP14.24□□□□□ -0.13
CAPN1-202ENST00000524773 UFL1O94874 794 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 ANP32DO95626 131 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 STAT1P42224 750 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 VPS41P49754 854 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 MARSP56192 900 aaKnown RBP14.24□□□□□ -0.13
CAPN1-202ENST00000524773 JAM2P57087 298 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 UBXN2AP68543 259 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 MESDQ14696 234 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 LACTB2Q53H82 288 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-202ENST00000524773 CTNNBL1Q8WYA6 563 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-202ENST00000524773 LBHD1Q9BQE6 289 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-202ENST00000524773 TXLNGYQ9BZA5 131 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 PABPC3Q9H361 631 aaKnown RBP14.24□□□□□ -0.13
CAPN1-202ENST00000524773 IRS2Q9Y4H2 1338 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 TCP11X1B4DZS4 312 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 RIMBP2O15034 1052 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 C21orf2O43822 256 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 ONECUT3O60422 494 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-202ENST00000524773 SPATA31C1P0DKV0 1188 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 SCNN1DP51172 638 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 PTENP60484 403 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 GPSM2P81274 684 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 RC3H1Q5TC82 1133 aaKnown RBP14.24□□□□□ -0.13
CAPN1-202ENST00000524773 TRPM8Q7Z2W7 1104 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 VPS36Q86VN1 386 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 SLC17A8Q8NDX2 589 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 CRAMP1Q96RY5 1269 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 NT5C3AQ9H0P0 336 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 KDM4CQ9H3R0 1056 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 GRHL1Q9NZI5 618 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 SAMD15Q9P1V8 674 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 PCDHA1Q9Y5I3 950 aa14.24□□□□□ -0.13
CAPN1-202ENST00000524773 DIAPH2O60879 1101 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 GCFC2P16383 781 aaKnown RBP14.23□□□□□ -0.13
CAPN1-202ENST00000524773 PEX19P40855 299 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 ALDH5A1P51649 535 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-202ENST00000524773 PPP4CP60510 307 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 RNASELQ05823 741 aaKnown RBP14.23□□□□□ -0.13
CAPN1-202ENST00000524773 ZNF543Q08ER8 600 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 TLDC1Q6P9B6 456 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 NSMFQ6X4W1 530 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 SH2D3AQ9BRG2 576 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 QTRT2Q9H974 415 aaKnown RBP14.23□□□□□ -0.13
CAPN1-202ENST00000524773 KCNK9Q9NPC2 374 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 ALG6Q9Y672 507 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 PCNTO95613 3336 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 FAM86B1E9PN63 330 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 IGF2BP3O00425 579 aaKnown RBP eCLIP14.23□□□□□ -0.13
CAPN1-202ENST00000524773 TGFB1I1O43294 461 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 RPS6KA4O75676 772 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 FAM86B2P0C5J1 330 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 MMP13P45452 471 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 CLK2P49760 499 aaKnown RBP14.23□□□□□ -0.13
CAPN1-202ENST00000524773 NAIF1Q69YI7 327 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-202ENST00000524773 ANKS4BQ8N8V4 417 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 PRELID2Q8N945 189 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 LMBR1Q8WVP7 490 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 FAXDC2Q96IV6 333 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 FAM167BQ9BTA0 163 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 ZNF287Q9HBT7 754 aa14.23□□□□□ -0.13
CAPN1-202ENST00000524773 ARHGEF10LQ9HCE6 1279 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms