RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CCNE1P24864 410 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 CYP2C18P33260 490 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 NR1I3Q14994 352 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 SHHQ15465 462 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 HSDL1Q3SXM5 330 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 KMT5BQ4FZB7 885 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 PCNX4Q63HM2 1172 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 B3GNT9Q6UX72 402 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 CYFIP1Q7L576 1253 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 CCDC186Q7Z3E2 898 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 TDHQ8IZJ6 230 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 SLC43A3Q8NBI5 491 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 RDM1Q8NG50 284 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 KAT2BQ92831 832 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 CCDC51Q96ER9 411 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 SPATA33Q96N06 139 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 PNMA5Q96PV4 448 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 MED15Q96RN5 788 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 NAA15Q9BXJ9 866 aaKnown RBP7.83□□□□□ -1.16
VPS11-201ENST00000524454 VAV3Q9UKW4 847 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 TBX21Q9UL17 535 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 GBF1Q92538 1859 aa7.83□□□□□ -1.16
VPS11-201ENST00000524454 MROH7Q68CQ1 1323 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 SPATA31C2B4DYI2 1134 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 TLR3O15455 904 aaKnown RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 MSH4O15457 936 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 ATP9AO75110 1047 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 PSMD10O75832 226 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 CABYRO75952 493 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 LYPLA2O95372 231 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 ACRP10323 421 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 ATP1A3P13637 1013 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 CSF2RAP15509 400 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 ITGB5P18084 799 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 CDK11BP21127 795 aaKnown RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 BMP8BP34820 402 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 CCT6AP40227 531 aaKnown RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 PBX1P40424 430 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 PRCPP42785 496 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 CCL23P55773 120 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 ASIC1P78348 528 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 FPGSQ05932 587 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 TBX2Q13207 712 aaPredicted RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 TPD52L1Q16890 204 aaPredicted RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 PRR16Q569H4 304 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 BRDTQ58F21 947 aaPredicted RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 CELF3Q5SZQ8 465 aaKnown RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 CENPPQ6IPU0 288 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 TTI2Q6NXR4 508 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 APTXQ7Z2E3 356 aaKnown RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 TRIM50Q86XT4 487 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 CCDC65Q8IXS2 484 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 CYP2W1Q8TAV3 490 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 NELFBQ8WX92 580 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 P2RX5Q93086 422 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 SCLYQ96I15 445 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 CDHR1Q96JP9 859 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 TOX2Q96NM4 488 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 INPP4AQ96PE3 977 aaPredicted RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 TMUB1Q9BVT8 246 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 TIPINQ9BVW5 301 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 REPIN1Q9BWE0 567 aaKnown RBP7.82□□□□□ -1.16
VPS11-201ENST00000524454 KCNF1Q9H3M0 494 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 MLXIPQ9HAP2 919 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 TBC1D22BQ9NU19 505 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 SEL1LQ9UBV2 794 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 TRIOBPQ9H2D6 2365 aa7.82□□□□□ -1.16
VPS11-201ENST00000524454 UBE4BO95155 1302 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 A0A087WWV3 80 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 GOLGA6L9A6NEM1 432 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 MYMKA6NI61 221 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 TRIM66O15016 1216 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 STX10O60499 249 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 EYA4O95677 639 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 GNA14O95837 355 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 TIMP1P01033 207 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 TPM2P07951 284 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 TPM1P09493 284 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 GAP43P17677 238 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 SCP2P22307 547 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 CDC25AP30304 524 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 ZNF76P36508 570 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 PTPN5P54829 565 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 ZNF200P98182 395 aaPredicted RBP7.81□□□□□ -1.16
VPS11-201ENST00000524454 PPP2R3AQ06190 1150 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 LAMC2Q13753 1193 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 NOLC1Q14978 699 aaKnown RBP eCLIP7.81□□□□□ -1.16
VPS11-201ENST00000524454 AMHR2Q16671 573 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 DGKDQ16760 1214 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 GNPTABQ3T906 1256 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 TCP11X2Q5H9J9 407 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 FIGNQ5HY92 759 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 UTP14CQ5TAP6 766 aaKnown RBP7.81□□□□□ -1.16
VPS11-201ENST00000524454 LRCH2Q5VUJ6 765 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 GDF6Q6KF10 455 aaPredicted RBP7.81□□□□□ -1.16
VPS11-201ENST00000524454 CNGA4Q8IV77 575 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 ZC3H3Q8IXZ2 948 aaKnown RBP7.81□□□□□ -1.16
VPS11-201ENST00000524454 SYT2Q8N9I0 419 aaPredicted RBP7.81□□□□□ -1.16
VPS11-201ENST00000524454 SPC24Q8NBT2 197 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms