RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	EIF3J	O75822	258 aa	Known RBP	5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	NR4A1	P22736	598 aa		5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	RGS19	P49795	217 aa		5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	MEOX1	P50221	254 aa		5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	SH3RF2	Q8TEC5	729 aa		5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	MIEF2	Q96C03	454 aa		5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	PHF20	Q9BVI0	1012 aa		5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	ARHGAP28	Q9P2N2	729 aa		5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	COX11	Q9Y6N1	276 aa		5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	YEATS2	Q9ULM3	1422 aa		5.64	□□□□□ -1.51
PCM1-223	ENST00000524356	IQGAP2	Q13576	1575 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	COL4A3	Q01955	1670 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	FAM221B	A6H8Z2	402 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	CREB3	O43889	395 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	PPFIA4	O75335	1185 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	CDC45	O75419	566 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	RHBDL3	P58872	404 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	ODR4	Q5SWX8	454 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	OTOP2	Q7RTS6	562 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	RTKN2	Q8IZC4	609 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	ZNF276	Q8N554	614 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	PROKR1	Q8TCW9	393 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	WNK4	Q96J92	1243 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	IER2	Q9BTL4	223 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	INCENP	Q9NQS7	918 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	TYW1	Q9NV66	732 aa	Known RBP	5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	FANCL	Q9NW38	375 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	SIRPG	Q9P1W8	387 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	TRPS1	Q9UHF7	1281 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	FAM184B	Q9ULE4	1060 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	UGGT2	Q9NYU1	1516 aa		5.63	□□□□□ -1.51
PCM1-223	ENST00000524356	BCORL1	Q5H9F3	1711 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	FAM90A27P	A6NNH2	459 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	PPP1R12A	O14974	1030 aa	Predicted RBP	5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	SSB	P05455	408 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	STAT3	P40763	770 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	RABL3	Q5HYI8	236 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	HECTD2	Q5U5R9	776 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	TMEM200B	Q69YZ2	307 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	ANKS3	Q6ZW76	656 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	RD3	Q7Z3Z2	195 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	BEND2	Q8NDZ0	799 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	SH3TC2	Q8TF17	1288 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	SGSM3	Q96HU1	749 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	DEPDC7	Q96QD5	511 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	TOR3A	Q9H497	397 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	GALNT8	Q9NY28	637 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	THRAP3	Q9Y2W1	955 aa	Known RBP	5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	HS3ST4	Q9Y661	456 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	XDH	P47989	1333 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356	SIGLEC1	Q9BZZ2	1709 aa		5.62	□□□□□ -1.51
PCM1-223	ENST00000524356		A0A0G2JNJ9	132 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356		A0A1W2PRX2	142 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	TCRBV5S4A2T	A0A5A2	114 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356		B2RBV5	119 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	KLF4	O43474	513 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	PRC1	O43663	620 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	SUSD5	O60279	629 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	ABCA8	O94911	1581 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	PTGS1	P23219	599 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	HSPA1L	P34931	641 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	ETFB	P38117	255 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	NASP	P49321	788 aa	Predicted RBP	5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	STAT5B	P51692	787 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	CD83	Q01151	205 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	MAP4K2	Q12851	820 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	PTPA	Q15257	358 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	RALBP1	Q15311	655 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	LY6G5C	Q5SRR4	150 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	BTBD8	Q5XKL5	378 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	KANK2	Q63ZY3	851 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	LBX2	Q6XYB7	198 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	SPATA31D1	Q6ZQQ2	1576 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	RAVER1	Q8IY67	606 aa	Known RBP	5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	HNRNPLL	Q8WVV9	542 aa	Known RBP	5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	GPR87	Q9BY21	358 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356		Q9UFV3	132 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	FZD1	Q9UP38	647 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	MRVI1	Q9Y6F6	885 aa		5.61	□□□□□ -1.51
PCM1-223	ENST00000524356	RIMS1	Q86UR5	1692 aa	Known RBP	5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	LTBP4	Q8N2S1	1624 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	FRMPD1	Q5SYB0	1578 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	KLRG2	A4D1S0	409 aa	Predicted RBP	5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	ABHD16A	O95870	558 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	PTPN1	P18031	435 aa	Known RBP	5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	MC4R	P32245	332 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	RABGGTB	P53611	331 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	RAB33A	Q14088	237 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	KIZ	Q2M2Z5	673 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	CCAR1	Q8IX12	1150 aa	Known RBP	5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	THAP3	Q8WTV1	239 aa	Predicted RBP	5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	KCTD13	Q8WZ19	329 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	RABGGTA	Q92696	567 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	TRIM55	Q9BYV6	548 aa		5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	SLK	Q9H2G2	1235 aa	Predicted RBP	5.6	□□□□□ -1.51
PCM1-223	ENST00000524356	STRC	Q7RTU9	1775 aa		5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms