RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 GPCPD1Q9NPB8 672 aa11.09□□□□□ -0.63
SPIDR-225ENST00000524141 GRHL1Q9NZI5 618 aa11.09□□□□□ -0.63
SPIDR-225ENST00000524141 ATF5Q9Y2D1 282 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-225ENST00000524141 COL24A1Q17RW2 1714 aa11.08□□□□□ -0.63
SPIDR-225ENST00000524141 PFASO15067 1338 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 ZBTB5O15062 677 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 RIPK2O43353 540 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 NEBLO76041 1014 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 ABCB4P21439 1286 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 CCND1P24385 295 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 RPA1P27694 616 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 HOXD13P35453 343 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 CNGA2Q16280 664 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 DDB1Q16531 1140 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 ACCSLQ4AC99 568 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 TBC1D9BQ66K14 1250 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 C11orf63Q6NUN7 778 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 LRRC47Q8N1G4 583 aaKnown RBP11.08□□□□□ -0.64
SPIDR-225ENST00000524141 DYDC1Q8WWB3 177 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-225ENST00000524141 SETDB2Q96T68 719 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 ABCF3Q9NUQ8 709 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 CCDC189A1A4V9 331 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 PPP1R12AO14974 1030 aaPredicted RBP11.08□□□□□ -0.64
SPIDR-225ENST00000524141 TBCAO75347 108 aaKnown RBP11.08□□□□□ -0.64
SPIDR-225ENST00000524141 PAX7P23759 505 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 PSMC2P35998 433 aaKnown RBP11.08□□□□□ -0.64
SPIDR-225ENST00000524141 PTGIRP43119 386 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 NCALDP61601 193 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 SATB1Q01826 763 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 NFIL3Q16649 462 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 GJB7Q6PEY0 223 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 ADAT2Q7Z6V5 191 aaKnown RBP11.08□□□□□ -0.64
SPIDR-225ENST00000524141 MBOAT7Q96N66 472 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 SYT11Q9BT88 431 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 MKNK1Q9BUB5 465 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 SEMA4AQ9H3S1 761 aa11.08□□□□□ -0.64
SPIDR-225ENST00000524141 TBX3O15119 743 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 PPP1R11O60927 126 aaPredicted RBP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 UBOX5O94941 541 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 TTLL1O95922 423 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 RARAP10276 462 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 RFX1P22670 979 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 RPL21P46778 160 aaKnown RBP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 IFNAR2P48551 515 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 DRAP1Q14919 205 aaPredicted RBP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 GRIK5Q16478 980 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 GALNTL6Q49A17 601 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 CYFIP1Q7L576 1253 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 CATSPER3Q86XQ3 398 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 FAM186BQ8IYM0 893 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 OLIG1Q8TAK6 271 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 AGAP11Q8TF27 550 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 ECT2Q9H8V3 914 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 FOCADQ5VW36 1801 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 IGSF9BQ9UPX0 1349 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 EIF3DO15371 548 aaKnown RBP eCLIP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 GCNT3O95395 438 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 GAP43P17677 238 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 TNFAIP3P21580 790 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 CTNNA2P26232 953 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 RFC4P35249 363 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 CASP4P49662 377 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 COPS2P61201 443 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 IRX1P78414 480 aaPredicted RBP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 PABPC4Q13310 644 aaKnown RBP eCLIP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 ZNF211Q13398 564 aaPredicted RBP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 AUHQ13825 339 aaKnown RBP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 SEL1L2Q5TEA6 688 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 TPTE2Q6XPS3 522 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 BARGINQ6ZT62 677 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 C15orf52Q6ZUT6 534 aaKnown RBP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 TRMT10CQ7L0Y3 403 aaKnown RBP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 EPS8L3Q8TE67 593 aaKnown RBP11.07□□□□□ -0.64
SPIDR-225ENST00000524141 ALG3Q92685 438 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 C18orf8Q96DM3 657 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 BORCS6Q96GS4 357 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 CCDC113Q9H0I3 377 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 OLFML3Q9NRN5 406 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 DNAJC12Q9UKB3 198 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 MTUS1Q9ULD2 1270 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 PCDHB13Q9Y5F0 798 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 FRMPD4Q14CM0 1322 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 MYO3BQ8WXR4 1341 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 PASKQ96RG2 1323 aa11.07□□□□□ -0.64
SPIDR-225ENST00000524141 KIF3CO14782 793 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 COPB2P35606 906 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 MAP2K1Q02750 393 aaPredicted RBP11.06□□□□□ -0.64
SPIDR-225ENST00000524141 BNIP1Q12981 228 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
SPIDR-225ENST00000524141 TCEAL1Q15170 157 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 LRCH2Q5VUJ6 765 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 MORC4Q8TE76 937 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 KLHL29Q96CT2 875 aa11.06□□□□□ -0.64
SPIDR-225ENST00000524141 THOC1Q96FV9 657 aaKnown RBP11.06□□□□□ -0.64
SPIDR-225ENST00000524141 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
SPIDR-225ENST00000524141 ANKRD27Q96NW4 1050 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms