RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	CDV3	Q9UKY7	258 aa	Known RBP	12.27	□□□□□ -0.45
SORBS3-222	ENST00000524057	UBIAD1	Q9Y5Z9	338 aa		12.27	□□□□□ -0.45
SORBS3-222	ENST00000524057	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.27	□□□□□ -0.45
SORBS3-222	ENST00000524057	ERICH2	A1L162	156 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	PIK3CD	O00329	1044 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	ADAMTS3	O15072	1205 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	MAFG	O15525	162 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	LRRN2	O75325	713 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	CTSA	P10619	480 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	SRF	P11831	508 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	CRYBB1	P53674	252 aa	Predicted RBP	12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	LMNB2	Q03252	620 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	MTMR1	Q13613	665 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	GIT2	Q14161	759 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	KRT32	Q14532	448 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	SART3	Q15020	963 aa	Known RBP	12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	KIZ	Q2M2Z5	673 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	TYW1B	Q6NUM6	668 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057		Q6ZUG5	572 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	TMTC3	Q6ZXV5	915 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	CATIP	Q7Z7H3	387 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	TMEM173	Q86WV6	379 aa	Predicted RBP	12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	ECHDC2	Q86YB7	292 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	PIBF1	Q8WXW3	757 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	CUL5	Q93034	780 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	TMEM169	Q96HH4	297 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	PPP1R16B	Q96T49	567 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	OSMR	Q99650	979 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	LARP6	Q9BRS8	491 aa	Known RBP	12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	SPZ1	Q9BXG8	430 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	JPH1	Q9HDC5	661 aa	Predicted RBP	12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	SLC9A2	Q9UBY0	812 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	ATRX	P46100	2492 aa		12.26	□□□□□ -0.45
SORBS3-222	ENST00000524057	CACNA1I	Q9P0X4	2223 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	DTNB	O60941	627 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	GPR32	O75388	356 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	SMARCA1	P28370	1054 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	GBP2	P32456	591 aa	Predicted RBP	12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	POLG	P54098	1239 aa	Predicted RBP	12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	NONO	Q15233	471 aa	Known RBP eCLIP	12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	PTPN14	Q15678	1187 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	ZNF528	Q3MIS6	628 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	C15orf39	Q6ZRI6	1047 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	DDX53	Q86TM3	631 aa	Known RBP	12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	PPFIBP1	Q86W92	1011 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	MICU3	Q86XE3	530 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	TMTC2	Q8N394	836 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	RNF169	Q8NCN4	708 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	HELQ	Q8TDG4	1101 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	BRF1	Q92994	677 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	KIF2C	Q99661	725 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	TM6SF1	Q9BZW5	370 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	FOXQ1	Q9C009	403 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	JADE2	Q9NQC1	790 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	SLC12A7	Q9Y666	1083 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	DENND4A	Q7Z401	1863 aa		12.25	□□□□□ -0.45
SORBS3-222	ENST00000524057	KLF18	A0A0U1RQI7	1052 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	CCDC69	A6NI79	296 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	SPTLC1	O15269	473 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	ATG7	O95352	703 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	ZSCAN20	P17040	1043 aa	Predicted RBP	12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	ADD1	P35611	737 aa	Known RBP	12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	CLCN4	P51793	760 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	ACTR2	P61160	394 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	NTRK3	Q16288	839 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	DCLRE1A	Q6PJP8	1040 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	BLOC1S2	Q6QNY1	142 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	NFXL1	Q6ZNB6	911 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	RUFY3	Q7L099	469 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	CCDC82	Q8N4S0	544 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	PJA1	Q8NG27	643 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	ATRIP	Q8WXE1	791 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	CNTNAP5	Q8WYK1	1306 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	NXPE3	Q969Y0	559 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	IGSF21	Q96ID5	467 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	KLHL5	Q96PQ7	755 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	MYADM	Q96S97	322 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	ARHGEF3	Q9NR81	526 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	EPS15L1	Q9UBC2	864 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	FBXO4	Q9UKT5	387 aa		12.24	□□□□□ -0.45
SORBS3-222	ENST00000524057	SPDYE4	A6NLX3	237 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	ZBTB42	B2RXF5	422 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	HBP1	O60381	514 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	VTN	P04004	478 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	HMGB1	P09429	215 aa	Known RBP	12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	KLRC2	P26717	231 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	PDIA3	P30101	505 aa	Known RBP	12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	STARD6	P59095	220 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	CSTF1	Q05048	431 aa	Known RBP	12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	PPM1J	Q5JR12	505 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	ZNF598	Q86UK7	904 aa	Known RBP	12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	ZBTB44	Q8NCP5	570 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	SECISBP2L	Q93073	1101 aa	Known RBP	12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	WDR6	Q9NNW5	1121 aa	Known RBP	12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	PARD6A	Q9NPB6	346 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	KCNH7	Q9NS40	1196 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	USP18	Q9UMW8	372 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	PCDHGA2	Q9Y5H1	932 aa		12.23	□□□□□ -0.45
SORBS3-222	ENST00000524057	NID2	Q14112	1375 aa		12.22	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms