RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 CDC42EP5Q6NZY7 148 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 HDXQ7Z353 690 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 ZNF804AQ7Z570 1209 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 HERC6Q8IVU3 1022 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 FTSJ3Q8IY81 847 aaKnown RBP6.17□□□□□ -1.42
PABPC1-223ENST00000523636 TEKT1Q969V4 418 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 WDR89Q96FK6 387 aaPredicted RBP6.17□□□□□ -1.42
PABPC1-223ENST00000523636 PAGR1Q9BTK6 254 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 CEP41Q9BYV8 373 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 ANKRD2Q9GZV1 360 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 MTUS1Q9ULD2 1270 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 SIPA1L1O43166 1804 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 FBN2P35556 2912 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 TANC1Q9C0D5 1861 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 ROBO3Q96MS0 1386 aa6.17□□□□□ -1.42
PABPC1-223ENST00000523636 NLRC5Q86WI3 1866 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 GFRA2O00451 464 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 CTNND1O60716 968 aaKnown RBP6.16□□□□□ -1.42
PABPC1-223ENST00000523636 DNAJC6O75061 913 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 TIAF1O95411 115 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 PROS1P07225 676 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 DNAJA1P31689 397 aaKnown RBP6.16□□□□□ -1.42
PABPC1-223ENST00000523636 ERVK-21P61565 698 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 ID3Q02535 119 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 KCNA10Q16322 511 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 CWF19L2Q2TBE0 894 aaKnown RBP6.16□□□□□ -1.42
PABPC1-223ENST00000523636 PRR23BQ6ZRT6 265 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 REC114Q7Z4M0 266 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 CXorf38Q8TB03 319 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 NKD1Q969G9 470 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 IL17RAQ96F46 866 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 SEC16BQ96JE7 1060 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 FAM84BQ96KN1 310 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-223ENST00000523636 MRIQ9BWK5 157 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 GSX1Q9H4S2 264 aaPredicted RBP6.16□□□□□ -1.42
PABPC1-223ENST00000523636 UBP1Q9NZI7 540 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 CRIM1Q9NZV1 1036 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 NRBP1Q9UHY1 535 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 R4GN57 208 aa6.16□□□□□ -1.42
PABPC1-223ENST00000523636 ASXL3Q9C0F0 2248 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 ADAMTS20P59510 1910 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 DDTLA6NHG4 134 aaPredicted RBP6.15□□□□□ -1.42
PABPC1-223ENST00000523636 ARVCFO00192 962 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 TMPRSS2O15393 492 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 ADCY6O43306 1168 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 TBX10O75333 385 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 ADH5P11766 374 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 PMLP29590 882 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 GYG1P46976 350 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 KCNJ4P48050 445 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 SOX9P48436 509 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 JAG1P78504 1218 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 SOX4Q06945 474 aaPredicted RBP6.15□□□□□ -1.42
PABPC1-223ENST00000523636 DDX10Q13206 875 aaKnown RBP6.15□□□□□ -1.42
PABPC1-223ENST00000523636 PABPC4Q13310 644 aaKnown RBP eCLIP6.15□□□□□ -1.421e-323■■■■■ 41.5
PABPC1-223ENST00000523636 UBE4AQ14139 1066 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 MBTPS1Q14703 1052 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 SHROOM1Q2M3G4 852 aaPredicted RBP6.15□□□□□ -1.42
PABPC1-223ENST00000523636 FDX2Q6P4F2 183 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 LRFN4Q6PJG9 635 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 CYFIP1Q7L576 1253 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 PCGF5Q86SE9 256 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 RNF180Q86T96 592 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 RPAINQ86UA6 219 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 REXO1Q8N1G1 1221 aaKnown RBP6.15□□□□□ -1.42
PABPC1-223ENST00000523636 CCDC191Q8NCU4 936 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 ELMO3Q96BJ8 720 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 ATXN3LQ9H3M9 355 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 HIPK3Q9H422 1215 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.15□□□□□ -1.42
PABPC1-223ENST00000523636 BTBD7Q9P203 1132 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 TCEAL9Q9UHQ7 104 aa6.15□□□□□ -1.42
PABPC1-223ENST00000523636 GRIN2DO15399 1336 aa6.15□□□□□ -1.43
PABPC1-223ENST00000523636 SYNRGQ9UMZ2 1314 aa6.15□□□□□ -1.43
PABPC1-223ENST00000523636 MCM3APO60318 1980 aa6.15□□□□□ -1.43
PABPC1-223ENST00000523636 TRIP12Q14669 1992 aaPredicted RBP6.15□□□□□ -1.43
PABPC1-223ENST00000523636 LINC01553A4QN01 128 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 C1QTNF9BB2RNN3 333 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 PDGFRBP09619 1106 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 C1QTNF9P0C862 333 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 RARBP10826 455 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 ATF4P18848 351 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-223ENST00000523636 TGM1P22735 817 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 ADORA2AP29274 412 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 IGHMBP2P38935 993 aaKnown RBP6.14□□□□□ -1.43
PABPC1-223ENST00000523636 ZNF165P49910 485 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 IRX3P78415 501 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-223ENST00000523636 ARID5AQ03989 594 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 DMWDQ09019 674 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 INPP5AQ14642 412 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 UVSSAQ2YD98 709 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 MAP9Q49MG5 647 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 GLIPR1L2Q4G1C9 344 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 WIPI1Q5MNZ9 446 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-223ENST00000523636 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-223ENST00000523636 CYP2W1Q8TAV3 490 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 PHOSPHO2Q8TCD6 241 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 WFDC12Q8WWY7 111 aa6.14□□□□□ -1.43
PABPC1-223ENST00000523636 MRPL38Q96DV4 380 aaKnown RBP6.14□□□□□ -1.43
PABPC1-223ENST00000523636 PLPPR2Q96GM1 343 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms