RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 RAB23Q9ULC3 237 aa4.47□□□□□ -1.69
NPM1-210ENST00000523339 LRFN2Q9ULH4 789 aa4.47□□□□□ -1.69
NPM1-210ENST00000523339 PLAGL2Q9UPG8 496 aa4.47□□□□□ -1.69
NPM1-210ENST00000523339 SUPT16HQ9Y5B9 1047 aaKnown RBP4.47□□□□□ -1.69
NPM1-210ENST00000523339 PCDHB12Q9Y5F1 795 aa4.47□□□□□ -1.69
NPM1-210ENST00000523339 SLC4A4Q9Y6R1 1079 aa4.47□□□□□ -1.69
NPM1-210ENST00000523339 CFAP47Q6ZTR5 3102 aa4.47□□□□□ -1.69
NPM1-210ENST00000523339 ZNF532Q9HCE3 1301 aa4.46□□□□□ -1.69
NPM1-210ENST00000523339 CYP2D7A0A087X1C5 515 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 MINDY4BA8MYZ0 360 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 C2CD4DB7Z1M9 353 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 PI15O43692 258 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 SURF6O75683 361 aaKnown RBP4.46□□□□□ -1.7
NPM1-210ENST00000523339 MBD4O95243 580 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 TTLL1O95922 423 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 GNAI2P04899 355 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 ZNF286BP0CG31 522 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 TSPY3P0CV98 308 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 TSPY8P0CW00 308 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 GNAT1P11488 350 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 ATP1A2P50993 1020 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 RAC1P63000 192 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 BMS1Q14692 1282 aaKnown RBP4.46□□□□□ -1.7
NPM1-210ENST00000523339 GPNMBQ14956 572 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 NONOQ15233 471 aaKnown RBP eCLIP4.46□□□□□ -1.73e-7■■■■□ 20.4
NPM1-210ENST00000523339 LY6KQ17RY6 165 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 CRTC2Q53ET0 693 aaPredicted RBP4.46□□□□□ -1.7
NPM1-210ENST00000523339 NAALADL2Q58DX5 795 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 PLEKHG4Q58EX7 1191 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 MUM1L1Q5H9M0 696 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 PLPP4Q5VZY2 271 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 IL31Q6EBC2 164 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 ANKRD54Q6NXT1 300 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 RNF207Q6ZRF8 634 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 C16orf86Q6ZW13 317 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 SESTD1Q86VW0 696 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 THNSL1Q8IYQ7 743 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 KLHL23Q8NBE8 558 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 DHX38Q92620 1227 aaKnown RBP4.46□□□□□ -1.7
NPM1-210ENST00000523339 MEIS3Q99687 375 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 RIOK1Q9BRS2 568 aaKnown RBP4.46□□□□□ -1.7
NPM1-210ENST00000523339 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.46□□□□□ -1.7
NPM1-210ENST00000523339 SMOC2Q9H3U7 446 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 TMEM260Q9NX78 707 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 NYAP2Q9P242 653 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 PUF60Q9UHX1 559 aaKnown RBP4.46□□□□□ -1.7
NPM1-210ENST00000523339 RCAN3Q9UKA8 241 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 ZNF292O60281 2723 aa4.46□□□□□ -1.7
NPM1-210ENST00000523339 EP300Q09472 2414 aaPredicted RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 SIPA1L1O43166 1804 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 LOC102724159A0A0B4J2E5 919 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 J3QW42 95 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 GOLIM4O00461 696 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 PRKAB2O43741 272 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 SORBS3O60504 671 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 APPP05067 770 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 ITGB1P05556 798 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 STAG3L1P0CL83 205 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 PRKCSHP14314 528 aaPredicted RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 PDE6AP16499 860 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 HOXB8P17481 243 aaPredicted RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 RASA1P20936 1047 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 MCCP23508 829 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 MTHFRP42898 656 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 RBM10P98175 930 aaKnown RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 ITIH3Q06033 890 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 RBL2Q08999 1139 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 TDGQ13569 410 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 PWP2Q15269 919 aaKnown RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 ATAT1Q5SQI0 421 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 C12orf60Q5U649 245 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 CWF19L1Q69YN2 538 aaKnown RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 XRRA1Q6P2D8 792 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 KCTD1Q719H9 257 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 RSPH3Q86UC2 560 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 RPAP2Q8IXW5 612 aaPredicted RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 SPPL3Q8TCT6 385 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 STAG1Q8WVM7 1258 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 DDX1Q92499 740 aaKnown RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 CASP10Q92851 521 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 P2RX5Q93086 422 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 ZNF512BQ96KM6 892 aaPredicted RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 ANTXR1Q9H6X2 564 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 ERVK-5Q9HDB9 667 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 SPATA6Q9NWH7 488 aaPredicted RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 ARPP21Q9UBL0 812 aaPredicted RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 NOB1Q9ULX3 412 aaKnown RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 RNF112Q9ULX5 631 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 STX8Q9UNK0 236 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 MRVI1Q9Y6F6 885 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 MRPL42Q9Y6G3 142 aaKnown RBP4.45□□□□□ -1.7
NPM1-210ENST00000523339 VPS13AQ96RL7 3174 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 DMXL1Q9Y485 3027 aa4.45□□□□□ -1.7
NPM1-210ENST00000523339 SETXQ7Z333 2677 aaKnown RBP4.44□□□□□ -1.7
NPM1-210ENST00000523339 KMT2EQ8IZD2 1858 aa4.44□□□□□ -1.7
NPM1-210ENST00000523339 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
NPM1-210ENST00000523339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.44□□□□□ -1.7
NPM1-210ENST00000523339 RBM47A0AV96 593 aaKnown RBP4.44□□□□□ -1.7
NPM1-210ENST00000523339 TGFBR3LH3BV60 316 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms