RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 C2orf71A6NGG8 1288 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 HIDE1A8MVS5 230 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 M0R2N6 131 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 PER2O15055 1255 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 GAS7O60861 476 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 STBD1O95210 358 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 PSMA5P28066 241 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 PDIA3P30101 505 aaKnown RBP10.59□□□□□ -0.71
SDC2-207ENST00000522911 IRX6P78412 446 aaPredicted RBP10.59□□□□□ -0.71
SDC2-207ENST00000522911 TBC1D8BQ0IIM8 1120 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 GIT2Q14161 759 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 SMC1AQ14683 1233 aaKnown RBP10.59□□□□□ -0.71
SDC2-207ENST00000522911 BMS1Q14692 1282 aaKnown RBP10.59□□□□□ -0.71
SDC2-207ENST00000522911 UBALD2Q8IYN6 164 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 PRSS33Q8NF86 280 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 CCDC136Q96JN2 1154 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 JPH2Q9BR39 696 aaPredicted RBP10.59□□□□□ -0.71
SDC2-207ENST00000522911 TEKT3Q9BXF9 490 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 INO80BQ9C086 356 aaPredicted RBP10.59□□□□□ -0.71
SDC2-207ENST00000522911 ADAM7Q9H2U9 754 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 ENTPD7Q9NQZ7 604 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 USTQ9Y2C2 406 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 SAMM50Q9Y512 469 aa10.59□□□□□ -0.71
SDC2-207ENST00000522911 VPS13AQ96RL7 3174 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 MAFO75444 373 aaPredicted RBP10.58□□□□□ -0.72
SDC2-207ENST00000522911 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.722e-6■■■□□ 14.6
SDC2-207ENST00000522911 TECP42680 631 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 PHKA2P46019 1235 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 ALDH7A1P49419 539 aaKnown RBP10.58□□□□□ -0.72
SDC2-207ENST00000522911 DNM2P50570 870 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 RAB27AP51159 221 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 RBM10P98175 930 aaKnown RBP10.58□□□□□ -0.72
SDC2-207ENST00000522911 TCF15Q12870 199 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 UGCGQ16739 394 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 LRCH2Q5VUJ6 765 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 PLPP4Q5VZY2 271 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 TMC7Q7Z402 723 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 EXOC8Q8IYI6 725 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 LRRC71Q8N4P6 559 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 ETNPPLQ8TBG4 499 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 PHKBQ93100 1093 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 RPGRIP1Q96KN7 1286 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 JAKMIP1Q96N16 626 aaKnown RBP10.58□□□□□ -0.72
SDC2-207ENST00000522911 GCOM2Q9BZD3 368 aaPredicted RBP10.58□□□□□ -0.72
SDC2-207ENST00000522911 UNC45AQ9H3U1 944 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 DZANK1Q9NVP4 752 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 HCFC2Q9Y5Z7 792 aa10.58□□□□□ -0.72
SDC2-207ENST00000522911 WDR81Q562E7 1941 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 REC8O95072 547 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 CSPG5O95196 566 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 PAPLNO95428 1278 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 CTSAP10619 480 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 MTHFRP42898 656 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 BCAR1P56945 870 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 PCBP1Q15365 356 aaKnown RBP eCLIP10.57□□□□□ -0.722e-14■■□□□ 13.1
SDC2-207ENST00000522911 NPY5RQ15761 445 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 CES5AQ6NT32 575 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 DDX53Q86TM3 631 aaKnown RBP10.57□□□□□ -0.72
SDC2-207ENST00000522911 ZDHHC14Q8IZN3 488 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 TBCKQ8TEA7 893 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 ZNF274Q96GC6 653 aaPredicted RBP10.57□□□□□ -0.72
SDC2-207ENST00000522911 RIPOR3Q96MK2 946 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 RHOBTB2Q9BYZ6 727 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 TM6SF1Q9BZW5 370 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 ZBP1Q9H171 429 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 VPS54Q9P1Q0 977 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 PCDHA4Q9UN74 947 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 SORCS3Q9UPU3 1222 aa10.57□□□□□ -0.72
SDC2-207ENST00000522911 KMT2EQ8IZD2 1858 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 PROB1E7EW31 1015 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 GAS2O43903 313 aaKnown RBP10.56□□□□□ -0.72
SDC2-207ENST00000522911 DKC1O60832 514 aaKnown RBP eCLIP10.56□□□□□ -0.72
SDC2-207ENST00000522911 CLASP2O75122 1294 aaKnown RBP10.56□□□□□ -0.72
SDC2-207ENST00000522911 DEXIO95424 95 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 C1RP00736 705 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 CPA1P15085 419 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 AVPR2P30518 371 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 NLRP5P59047 1200 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 PPP2R5CQ13362 524 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 DRP2Q13474 957 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 IER5LQ5T953 404 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 PPP4R3AQ6IN85 833 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 KIAA1841Q6NSI8 718 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 MIER3Q7Z3K6 550 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 MRPL10Q7Z7H8 261 aaKnown RBP10.56□□□□□ -0.72
SDC2-207ENST00000522911 TRIM22Q8IYM9 498 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 PLCD3Q8N3E9 789 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 HELQQ8TDG4 1101 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 NLRP7Q8WX94 980 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 TMEM169Q96HH4 297 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 IGSF21Q96ID5 467 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 FAM20AQ96MK3 541 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 PPP1R16BQ96T49 567 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 SLC26A6Q9BXS9 759 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 IFT122Q9HBG6 1241 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 ZSWIM6Q9HCJ5 1215 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 KCNMB3Q9NPA1 279 aa10.56□□□□□ -0.72
SDC2-207ENST00000522911 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
SDC2-207ENST00000522911 TBX3O15119 743 aa10.55□□□□□ -0.72
SDC2-207ENST00000522911 INPPL1O15357 1258 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms