RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 MAMDC4Q6UXC1 1216 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-211ENST00000522802 DYMQ7RTS9 669 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 DEFB128Q7Z7B8 93 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 TTC6Q86TZ1 520 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 FAM20CQ8IXL6 584 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 MAGEB6Q8N7X4 407 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 KATNBL1Q9H079 304 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 UBE2ZQ9H832 354 aaPredicted RBP7.63□□□□□ -1.19
VPS13B-211ENST00000522802 VCPKMTQ9H867 229 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 SMC4Q9NTJ3 1288 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 FAM105AQ9NUU6 356 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 TMX2Q9Y320 296 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 RIPK3Q9Y572 518 aa7.63□□□□□ -1.19
VPS13B-211ENST00000522802 DDX49Q9Y6V7 483 aaKnown RBP7.63□□□□□ -1.19
VPS13B-211ENST00000522802 PNMA6EA0A0J9YXQ4 647 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 FAM221AA4D161 298 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 H2AFB1P0C5Y9 115 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 H2AFB2P0C5Z0 115 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 CYP2C9P11712 490 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 AKR1B1P15121 316 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 KCNA5P22460 613 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 EIF4A3P38919 411 aaKnown RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 STAT3P40763 770 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 USP11P51784 963 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 ITGA7Q13683 1181 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 INPP5AQ14642 412 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 RSPO4Q2I0M5 234 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 TNNI3KQ59H18 835 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 FAM83BQ5T0W9 1011 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 PRR23CQ6ZRP0 262 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 TMEM179Q6ZVK1 233 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 TMCO2Q7Z6W1 182 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 TLK2Q86UE8 772 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 HERC6Q8IVU3 1022 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 MSL3Q8N5Y2 521 aaKnown RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 EZH1Q92800 747 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 RIOK1Q9BRS2 568 aaKnown RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 ATXN3LQ9H3M9 355 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 SPC25Q9HBM1 224 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 TRMT13Q9NUP7 481 aaKnown RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 DDX41Q9UJV9 622 aaKnown RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 AP4E1Q9UPM8 1137 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 FPGT-TNNI3KV9GXZ4 949 aa7.62□□□□□ -1.19
VPS13B-211ENST00000522802 ZFHX2Q9C0A1 2572 aaPredicted RBP7.62□□□□□ -1.19
VPS13B-211ENST00000522802 TECTAO75443 2155 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-211ENST00000522802 GFRA2O00451 464 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 DCXO43602 365 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 GAS2O43903 313 aaKnown RBP7.61□□□□□ -1.19
VPS13B-211ENST00000522802 GREM1O60565 184 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 ASPAP45381 313 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 CDK8P49336 464 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 NKX3-2P78367 333 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 LEXMQ3ZCV2 418 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 SGO2Q562F6 1265 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 SNRNP48Q6IEG0 339 aaKnown RBP7.61□□□□□ -1.19
VPS13B-211ENST00000522802 FBXL19Q6PCT2 694 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 LRFN4Q6PJG9 635 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 BNC2Q6ZN30 1099 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-211ENST00000522802 ARMCX2Q7L311 632 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 CYFIP1Q7L576 1253 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 C12orf40Q86WS4 652 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 PRSS33Q8NF86 280 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 GATAD2BQ8WXI9 593 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 DYNLL2Q96FJ2 89 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 SLC9A7Q96T83 725 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 NUP88Q99567 741 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-211ENST00000522802 TEX13BQ9BXU2 312 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 ACSS3Q9H6R3 686 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 ANTXR1Q9H6X2 564 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 IGSF5Q9NSI5 407 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 MCM9Q9NXL9 1143 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 ADAMTS1Q9UHI8 967 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 DBNLQ9UJU6 430 aaKnown RBP7.61□□□□□ -1.19
VPS13B-211ENST00000522802 MTUS1Q9ULD2 1270 aa7.61□□□□□ -1.19
VPS13B-211ENST00000522802 MYH4Q9Y623 1939 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 ZNF536O15090 1300 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-211ENST00000522802 CILPO75339 1184 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 F13A1P00488 732 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 PFKMP08237 780 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 ALADP13716 330 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 COPB2P35606 906 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 RACK1P63244 317 aaKnown RBP7.6□□□□□ -1.19
VPS13B-211ENST00000522802 FAM160A1Q05DH4 1040 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 FSCN1Q16658 493 aaKnown RBP7.6□□□□□ -1.19
VPS13B-211ENST00000522802 ZNF394Q53GI3 561 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 CCDC158Q5M9N0 1113 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 TMEM63BQ5T3F8 832 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 HDXQ7Z353 690 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 CCDC144CPQ8IYA2 1237 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 RPUSD2Q8IZ73 545 aaKnown RBP7.6□□□□□ -1.19
VPS13B-211ENST00000522802 GOLM1Q8NBJ4 401 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 RNF214Q8ND24 703 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 PPP1R13LQ8WUF5 828 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 FBLIM1Q8WUP2 373 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 SDR42E1Q8WUS8 393 aa7.6□□□□□ -1.19
VPS13B-211ENST00000522802 DDX11Q96FC9 970 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms