RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	PNMA8A	Q86V59	439 aa	Predicted RBP	18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	EHBP1	Q8NDI1	1231 aa		18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	ZSWIM2	Q8NEG5	633 aa		18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	ZNF526	Q8TF50	670 aa	Predicted RBP	18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	BSND	Q8WZ55	320 aa		18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	SPAG5	Q96R06	1193 aa		18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	EPC1	Q9H2F5	836 aa		18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	ST6GALNAC4	Q9H4F1	302 aa		18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	RRAGC	Q9HB90	399 aa		18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	HDAC6	Q9UBN7	1215 aa		18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	AGTPBP1	Q9UPW5	1226 aa		18.2	■□□□□ 0.5
FAM49B-223	ENST00000522746	SOWAHB	A6NEL2	793 aa		18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746	ATP1A1	P05023	1023 aa	Known RBP	18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746	MAGEA1	P43355	309 aa		18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746	KLHL30	Q0D2K2	578 aa		18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746		Q3C1V9	767 aa		18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746	TEX35	Q5T0J7	233 aa		18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746	RSRC2	Q7L4I2	434 aa	Known RBP	18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746	SECISBP2L	Q93073	1101 aa	Known RBP	18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746	MLXIP	Q9HAP2	919 aa		18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746	SEPT9	Q9UHD8	586 aa	Predicted RBP	18.19	■□□□□ 0.5
FAM49B-223	ENST00000522746	CCDC169	A6NNP5	214 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	RBAK-RBAKDN	I3L0D1	243 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	SUPT20HL2	P0C7V6	817 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	ICAM3	P32942	547 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	NPTX2	P47972	431 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	BFSP1	Q12934	665 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	MYBPC2	Q14324	1141 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	PPP2R5A	Q15172	486 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	SRGAP1	Q7Z6B7	1085 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	MYO6	Q9UM54	1294 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	POTEB2	H3BUK9	544 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	DKC1	O60832	514 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	DLG4	P78352	724 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	TUBB2A	Q13885	445 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	MIS18BP1	Q6P0N0	1132 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	IRF2BP2	Q7Z5L9	587 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	TMEM161B	Q8NDZ6	487 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	TUBB2B	Q9BVA1	445 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	RBPJL	Q9UBG7	517 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	CAPN6	Q9Y6Q1	641 aa		18.18	■□□□□ 0.5
FAM49B-223	ENST00000522746	CYP2C8	P10632	490 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	DMP1	Q13316	513 aa	Predicted RBP	18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	IQCE	Q6IPM2	695 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	TRAPPC11	Q7Z392	1133 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	C12orf56	Q8IXR9	622 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	ANKRD13C	Q8N6S4	541 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	SLC10A4	Q96EP9	437 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	XPNPEP1	Q9NQW7	623 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	HSPBP1	Q9NZL4	362 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	FBXL5	Q9UKA1	691 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	IGSF9B	Q9UPX0	1349 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	MYH9	P35579	1960 aa	Known RBP	18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746		A0A087X0T9	212 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	PJA2	O43164	708 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	MOCS3	O95396	460 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	FAM228B	P0C875	321 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	JAM2	P57087	298 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	CHMP4BP1	P59074	171 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	PTK2	Q05397	1052 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	CEP112	Q8N8E3	955 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	PDLIM7	Q9NR12	457 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	CYP26B1	Q9NR63	512 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	ADAMTS1	Q9UHI8	967 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	SALL4	Q9UJQ4	1053 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	TBX20	Q9UMR3	447 aa		18.17	■□□□□ 0.5
FAM49B-223	ENST00000522746	SYNGAP1	Q96PV0	1343 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	PGK2	P07205	417 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	PNMA6A	P0CW24	399 aa	Predicted RBP	18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	H2AFX	P16104	143 aa	Predicted RBP	18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	ATP4A	P20648	1035 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	UBA1	P22314	1058 aa	Known RBP	18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	EDNRB	P24530	442 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	SMTN	P53814	917 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	MYL7	Q01449	175 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	SLC18A3	Q16572	532 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	GOLGA1	Q92805	767 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	KIFAP3	Q92845	792 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	KMT5A	Q9NQR1	393 aa		18.16	■□□□□ 0.5
FAM49B-223	ENST00000522746	DENND3	A2RUS2	1198 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	ANKRD63	C9JTQ0	380 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	SRGAP2	O75044	1071 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	KRT13	P13646	458 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	WHAMMP3	Q1A5X7	153 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	MTERF2	Q49AM1	385 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	PAPD7	Q5XG87	772 aa	Known RBP	18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	ZNF571	Q7Z3V5	609 aa	Predicted RBP	18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	XXYLT1	Q8NBI6	393 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	TMEM174	Q8WUU8	243 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	ADGRA3	Q8IWK6	1321 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	GOLGA8IP	A6NC78	632 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	GOLGA8J	A6NMD2	632 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	DGAT1	O75907	488 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	ATG7	O95352	703 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	ADSS	P30520	456 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	XKR3	Q5GH77	459 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	EEPD1	Q7L9B9	569 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	MAP4K3	Q8IVH8	894 aa		18.15	■□□□□ 0.5
FAM49B-223	ENST00000522746	SLC17A8	Q8NDX2	589 aa		18.15	■□□□□ 0.5

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