RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	ALDH1A2	O94788	518 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	SLFN14	P0C7P3	912 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	RALB	P11234	206 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	GUCY2C	P25092	1073 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	CTCF	P49711	727 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	APLP1	P51693	650 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	LRRC24	Q50LG9	513 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	NECAB2	Q7Z6G3	386 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	FAM186B	Q8IYM0	893 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	CCDC197	Q8NCU1	140 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	OR8K1	Q8NGG5	319 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	ATL2	Q8NHH9	583 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	SPATA16	Q9BXB7	569 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	ERAP1	Q9NZ08	941 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	COX16	Q9P0S2	106 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	IQSEC2	Q5JU85	1478 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653		A0A1W2PQ27	194 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653		A0A1W2PQ64	194 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653		A0A1W2PQD8	194 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PPFIA2	O75334	1257 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	STAT5B	P51692	787 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	TRIM28	Q13263	835 aa	Known RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	KLHDC4	Q8TBB5	520 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	HDAC11	Q96DB2	347 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	DDX27	Q96GQ7	796 aa	Known RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	SH3GL3	Q99963	347 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	OSBPL3	Q9H4L5	887 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	ABCB6	Q9NP58	842 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	USP31	Q70CQ4	1352 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PSMD14	O00487	310 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PFKFB1	P16118	471 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	IGFBP4	P22692	258 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	RPL10A	P62906	217 aa	Known RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	SV2C	Q496J9	727 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	ITPRIPL1	Q6GPH6	555 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	ENOX1	Q8TC92	643 aa	Known RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	SCG3	Q8WXD2	468 aa	Known RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	UIMC1	Q96RL1	719 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	KLHL14	Q9P2G3	628 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	DSE	Q9UL01	958 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	CDC42BPB	Q9Y5S2	1711 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PLSCR1	O15162	318 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PSMD3	O43242	534 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PFDN1	O60925	122 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PYGL	P06737	847 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	GYS2	P54840	703 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	MTMR2	Q13614	643 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	NAA30	Q147X3	362 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	KRT39	Q6A163	491 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	SLC35F6	Q8N357	371 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	ARMC2	Q8NEN0	867 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	USP28	Q96RU2	1077 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	SLC24A3	Q9HC58	644 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	NYAP2	Q9P242	653 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PCDHA6	Q9UN73	950 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PIN4	Q9Y237	131 aa	Known RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PCDHA8	Q9Y5H6	950 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PCDHA10	Q9Y5I2	948 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	BNIP3L	O60238	219 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	QARS	P47897	775 aa	Known RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	CDK17	Q00537	523 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	NBPF9	Q3BBW0	867 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	RASIP1	Q5U651	963 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	CCDC62	Q6P9F0	684 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	ACSF2	Q96CM8	615 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	SLITRK1	Q96PX8	696 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	MTG1	Q9BT17	334 aa	Predicted RBP	11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	DEFB129	Q9H1M3	183 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	TAB2	Q9NYJ8	693 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	STAP2	Q9UGK3	403 aa		11.05	□□□□□ -0.64
TCF7-223	ENST00000522653	PNMA6E	A0A0J9YXQ4	647 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	DYRK3	O43781	588 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	CMA1	P23946	247 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	ZNF131	P52739	623 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	STX1B	P61266	288 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	IRX4	P78413	519 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	TMEM132D	Q14C87	1099 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	BSPRY	Q5W0U4	402 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	TTC19	Q6DKK2	380 aa	Predicted RBP	11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	CD302	Q8IX05	232 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	KLHL7	Q8IXQ5	586 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	CEP120	Q8N960	986 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	GGPS1	O95749	300 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	GUCY2F	P51841	1108 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	PNOC	Q13519	176 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	XKR3	Q5GH77	459 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	PBXIP1	Q96AQ6	731 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	FAM129A	Q9BZQ8	928 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	RNF208	Q9H0X6	261 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	FANCL	Q9NW38	375 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	NXF1	Q9UBU9	619 aa	Known RBP	11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	SERTAD1	Q9UHV2	236 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	NCKAP1	Q9Y2A7	1128 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	DIP2A	Q14689	1571 aa		11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	SYNCRIP	O60506	623 aa	Known RBP	11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	AFP	P02771	609 aa	Known RBP	11.04	□□□□□ -0.64
TCF7-223	ENST00000522653	MCAM	P43121	646 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms