RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 CXCL14O95715 111 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 EOMESO95936 686 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 HMGB1P09429 215 aaKnown RBP17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 GNA11P29992 359 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 FGD1P98174 961 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 ZBTB33Q86T24 672 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 CCDC12Q8WUD4 166 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 NLRP7Q8WX94 980 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 LPPQ93052 612 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 JAKMIP1Q96N16 626 aaKnown RBP17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 SCLT1Q96NL6 688 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 RIT2Q99578 217 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 H0Y858 1186 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 B4GALT3O60512 393 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 GAS7O60861 476 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 ASGR2P07307 311 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 PHKA2P46019 1235 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 TBC1D8BQ0IIM8 1120 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 TPRNQ4KMQ1 711 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 RARS2Q5T160 578 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 LRCH2Q5VUJ6 765 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 VPS52Q8N1B4 723 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 ZNF710Q8N1W2 664 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 SLC26A6Q9BXS9 759 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 ZBP1Q9H171 429 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 NR2E1Q9Y466 385 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 SNX14Q9Y5W7 946 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 DCHS1Q96JQ0 3298 aa17.22■□□□□ 0.35
TRAPPC9-213ENST00000522504 A0A087WZ62 844 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 ST18O60284 1047 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 GFRA3O60609 400 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 PSMD10O75832 226 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 EPCAMP16422 314 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 CA8P35219 290 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 ALDH7A1P49419 539 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 ITIH3Q06033 890 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 MTERF2Q49AM1 385 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 CES5AQ6NT32 575 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 B3GNT9Q6UX72 402 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 ATOH1Q92858 354 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 FDXACB1Q9BRP7 624 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 VN1R3Q9BXE9 311 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 TEKT3Q9BXF9 490 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 NIFKQ9BYG3 293 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 SPTBN4Q9H254 2564 aa17.21■□□□□ 0.35
TRAPPC9-213ENST00000522504 FRYLO94915 3013 aa17.21■□□□□ 0.34
TRAPPC9-213ENST00000522504 IGKV6-21A0A0C4DH24 114 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 ZC3H11AO75152 810 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 CDC45O75419 566 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 TDP2O95551 362 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 SFNP31947 248 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 USP11P51784 963 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 JAK3P52333 1124 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 KSR1Q8IVT5 923 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 TMEM105Q8N8V8 129 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 BICD2Q8TD16 824 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 SLC22A17Q8WUG5 538 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 TMEM169Q96HH4 297 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 NECTIN4Q96NY8 510 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 MRPL9Q9BYD2 267 aaKnown RBP17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 AGXT2Q9BYV1 514 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 NRDE2Q9H7Z3 1164 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 TBC1D13Q9NVG8 400 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 DACT1Q9NYF0 836 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 SEPT9Q9UHD8 586 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 SORCS3Q9UPU3 1222 aa17.2■□□□□ 0.34
TRAPPC9-213ENST00000522504 WDR81Q562E7 1941 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 MYO10Q9HD67 2058 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 PTPRZ1P23471 2315 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 RIF1Q5UIP0 2472 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 IFNAR1P17181 557 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 CCT2P78371 535 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 MTMR3Q13615 1198 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 UBALD2Q8IYN6 164 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 TBCKQ8TEA7 893 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 IGSF21Q96ID5 467 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 TRAIPQ9BWF2 469 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 RNF26Q9BY78 433 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 CHST12Q9NRB3 414 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 DNAJB4Q9UDY4 337 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 LIMD1Q9UGP4 676 aa17.19■□□□□ 0.34
TRAPPC9-213ENST00000522504 GALR2O43603 387 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 OFD1O75665 1012 aa17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 GALTP07902 379 aa17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 CTSAP10619 480 aa17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 RPS6KB1P23443 525 aa17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 PDIA3P30101 505 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 HSPA4P34932 840 aa17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 MTHFRP42898 656 aa17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 AFF1P51825 1210 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 AKAP17AQ02040 695 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 Q4G0T1 1027 aa17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 XKR3Q5GH77 459 aa17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 TWF2Q6IBS0 349 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 BLOC1S2Q6QNY1 142 aa17.18■□□□□ 0.34
TRAPPC9-213ENST00000522504 MIER3Q7Z3K6 550 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms