RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 SCLT1Q96NL6 688 aa13.67□□□□□ -0.22
PABPC1-219ENST00000522387 PDLIM7Q9NR12 457 aa13.67□□□□□ -0.22
PABPC1-219ENST00000522387 GTF2IRD1Q9UHL9 959 aa13.67□□□□□ -0.22
PABPC1-219ENST00000522387 KPNA6O60684 536 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 GCNT3O95395 438 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 CTSHP09668 335 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 MYBP10242 640 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 MNX1P50219 401 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-219ENST00000522387 KIZQ2M2Z5 673 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 FAM178BQ8IXR5 827 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 RETREG2Q8NC44 543 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 KIAA0895Q8NCT3 520 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 SPATA20Q8TB22 786 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 GSDMAQ96QA5 445 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 LRRC27Q9C0I9 530 aa13.66□□□□□ -0.22
PABPC1-219ENST00000522387 GLRA2P23416 452 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 STX17P56962 302 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 MTERF4Q7Z6M4 381 aaKnown RBP13.65□□□□□ -0.22
PABPC1-219ENST00000522387 RNF149Q8NC42 400 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 MCPH1Q8NEM0 835 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 PKNOX2Q96KN3 472 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 COL4A3BPQ9Y5P4 624 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 ADGRA3Q8IWK6 1321 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 K7ENM7 598 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 B4GALT4O60513 344 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 PRPF6O94906 941 aaKnown RBP13.65□□□□□ -0.22
PABPC1-219ENST00000522387 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
PABPC1-219ENST00000522387 RFC5P40937 340 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 NPTX2P47972 431 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 NLRP11P59045 1033 aaKnown RBP13.65□□□□□ -0.22
PABPC1-219ENST00000522387 NKX3-2P78367 333 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 DMP1Q13316 513 aaPredicted RBP13.65□□□□□ -0.22
PABPC1-219ENST00000522387 HSP90AA4PQ58FG1 418 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 FAM26FQ5R3K3 315 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 RBM43Q6ZSC3 357 aaKnown RBP13.65□□□□□ -0.22
PABPC1-219ENST00000522387 C11orf57Q6ZUT1 292 aaPredicted RBP13.65□□□□□ -0.22
PABPC1-219ENST00000522387 KIAA0319LQ8IZA0 1049 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 MYRIPQ8NFW9 859 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
PABPC1-219ENST00000522387 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 CRISPLD2Q9H0B8 497 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 CDHR5Q9HBB8 845 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 CBX8Q9HC52 389 aa13.65□□□□□ -0.22
PABPC1-219ENST00000522387 LARSQ9P2J5 1176 aaKnown RBP13.65□□□□□ -0.22
PABPC1-219ENST00000522387 FGFR4P22455 802 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 TMOD1P28289 359 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 PRCPP42785 496 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 DNM2P50570 870 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 CAPSQ13938 189 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 C17orf53Q8N3J3 647 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-219ENST00000522387 KCTD17Q8N5Z5 321 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 SPC24Q8NBT2 197 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 NLRP7Q8WX94 980 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 CTAGE1Q96RT6 745 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 TSEN34Q9BSV6 310 aaKnown RBP13.64□□□□□ -0.23
PABPC1-219ENST00000522387 KCND2Q9NZV8 630 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 A0A087WZ62 844 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 RHOBTB3O94955 611 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 MYL1P05976 194 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 PLS3P13797 630 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 MORC3Q14149 939 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 NT5DC1Q5TFE4 455 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 FAM200AQ8TCP9 573 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 FDXACB1Q9BRP7 624 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-219ENST00000522387 KMT5AQ9NQR1 393 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 ODF2LQ9ULJ1 636 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 PHF24Q9UPV7 400 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 LOXHD1Q8IVV2 1947 aa13.64□□□□□ -0.23
PABPC1-219ENST00000522387 IGKV6-21A0A0C4DH24 114 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 RRN3P2A6NIE6 340 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 GNAT1P11488 350 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 THPOP40225 353 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 ZNF165P49910 485 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 ADAM17P78536 824 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 CDR2LQ86X02 465 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-219ENST00000522387 KIFAP3Q92845 792 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 CCDC47Q96A33 483 aaKnown RBP13.63□□□□□ -0.23
PABPC1-219ENST00000522387 IFT74Q96LB3 600 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 PRIMPOLQ96LW4 560 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 FIZ1Q96SL8 496 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 OSMRQ99650 979 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 PCDHA2Q9Y5H9 948 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 A0A0U1RQG5 324 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-219ENST00000522387 TRIM49BA6NDI0 452 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 TISP43B9A030 160 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 ARVCFO00192 962 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 MAGEB2O15479 319 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 CABYRO75952 493 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 ARL2P36404 184 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 ZNF658Q5TYW1 1059 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-219ENST00000522387 CNNM4Q6P4Q7 775 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 ELOA2Q8IYF1 753 aaPredicted RBP13.63□□□□□ -0.23
PABPC1-219ENST00000522387 MINDY3Q9H8M7 445 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 RMND1Q9NWS8 449 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 ATP11BQ9Y2G3 1177 aa13.63□□□□□ -0.23
PABPC1-219ENST00000522387 FRMD3A2A2Y4 597 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 DENND3A2RUS2 1198 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 MBLAC1A4D2B0 266 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms