RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SMIM10L2BP0DMW5 78 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 CCNE1P24864 410 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 ARL2P36404 184 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 NAMPTP43490 491 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 LHX8Q68G74 356 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 MAEAQ7L5Y9 396 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 AOPEPQ8N6M6 819 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 ENOX1Q8TC92 643 aaKnown RBP14.41□□□□□ -0.1
CPNE3-205ENST00000522240 PSPC1Q8WXF1 523 aaKnown RBP14.41□□□□□ -0.1
CPNE3-205ENST00000522240 IFT74Q96LB3 600 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 TSEN34Q9BSV6 310 aaKnown RBP14.41□□□□□ -0.1
CPNE3-205ENST00000522240 PAK6Q9NQU5 681 aaPredicted RBP14.41□□□□□ -0.1
CPNE3-205ENST00000522240 CTNND2Q9UQB3 1225 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 BICDL2A1A5D9 508 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 MOXD2PA6NHM9 499 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 SFI1A8K8P3 1242 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 BECN2A8MW95 431 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 K7ENM7 598 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 TULP1O00294 542 aaPredicted RBP14.4□□□□□ -0.1
CPNE3-205ENST00000522240 GCNT3O95395 438 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 CASP5P51878 434 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 SMTNP53814 917 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 MXD4Q14582 209 aaPredicted RBP14.4□□□□□ -0.1
CPNE3-205ENST00000522240 LRRC41Q15345 812 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 UVSSAQ2YD98 709 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 KLHL10Q6JEL2 608 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 ZNF720Q7Z2F6 126 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 DHX40Q8IX18 779 aaKnown RBP14.4□□□□□ -0.1
CPNE3-205ENST00000522240 RNF214Q8ND24 703 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 GLIS3Q8NEA6 775 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 SCFD1Q8WVM8 642 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 TRAPPC12Q8WVT3 735 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 NELFBQ8WX92 580 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 P2RX5Q93086 422 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 NTPCRQ9BSD7 190 aaKnown RBP14.4□□□□□ -0.1
CPNE3-205ENST00000522240 STRA6Q9BX79 667 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 FGFBP2Q9BYJ0 223 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 TBC1D7Q9P0N9 293 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 PHLPP2Q6ZVD8 1323 aa14.4□□□□□ -0.1
CPNE3-205ENST00000522240 CENPFP49454 3210 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 MBLAC1A4D2B0 266 aaPredicted RBP14.39□□□□□ -0.11
CPNE3-205ENST00000522240 GOLGA6L19H0YKK7 550 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 ASGR1P07306 291 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 MYBP10242 640 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 GNAT1P11488 350 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 GLRA2P23416 452 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 KLRC1P26715 233 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 TMOD1P28289 359 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 NMT1P30419 496 aaKnown RBP14.39□□□□□ -0.11
CPNE3-205ENST00000522240 NPTX2P47972 431 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 DNM2P50570 870 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 PEX3P56589 373 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 TPM4P67936 248 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 ADAM17P78536 824 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 LRRC63Q05C16 580 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 KCNA10Q16322 511 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 CENPPQ6IPU0 288 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 LUZP1Q86V48 1076 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 SESTD1Q86VW0 696 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 ARRDC4Q8NCT1 418 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 ZNF507Q8TCN5 953 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 ASAP3Q8TDY4 903 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 LMBR1Q8WVP7 490 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 BSNDQ8WZ55 320 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 TMEM143Q96AN5 459 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 UNC93B1Q9H1C4 597 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 GRPEL1Q9HAV7 217 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 ARHGAP28Q9P2N2 729 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 MAPK8IP1Q9UQF2 711 aa14.39□□□□□ -0.11
CPNE3-205ENST00000522240 ZMYM2Q9UBW7 1377 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 KAT6AQ92794 2004 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 SMIM35A0A1B0GVV1 85 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 C17orf102A2RUQ5 167 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 ASAP2O43150 1006 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 MRE11P49959 708 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 CLCN3P51790 818 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 IGBP1P78318 339 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 GTF2BQ00403 316 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 POU5F1BQ06416 359 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 NCAPHQ15003 741 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 KNOP1Q1ED39 458 aaKnown RBP14.38□□□□□ -0.11
CPNE3-205ENST00000522240 ZCWPW2Q504Y3 356 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 MARCH8Q5T0T0 291 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 L1TD1Q5T7N2 865 aaKnown RBP14.38□□□□□ -0.11
CPNE3-205ENST00000522240 SPATA1Q5VX52 437 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 EFCAB12Q6NXP0 572 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 TTI2Q6NXR4 508 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 NFRKBQ6P4R8 1299 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 CXCL17Q6UXB2 119 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 LRRC71Q8N4P6 559 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 C7orf31Q8N865 590 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 TMEM161BQ8NDZ6 487 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 ARMC5Q96C12 935 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 MED15Q96RN5 788 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 TSG101Q99816 390 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 POLD4Q9HCU8 107 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 KMT5AQ9NQR1 393 aa14.38□□□□□ -0.11
CPNE3-205ENST00000522240 SETD4Q9NVD3 440 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms