RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SLC35G1Q2M3R5 365 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 IER5Q5VY09 327 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 SLC24A5Q71RS6 500 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 SLC39A11Q8N1S5 342 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 PJA1Q8NG27 643 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 VAT1LQ9HCJ6 419 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 SPG21Q9NZD8 308 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 ANGPTL2Q9UKU9 493 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 USP18Q9UMW8 372 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 SMG5Q9UPR3 1016 aaKnown RBP10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 NOC2LQ9Y3T9 749 aaKnown RBP10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 MTF2Q9Y483 593 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 KDM3AQ9Y4C1 1321 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 MYH6P13533 1939 aa10.27□□□□□ -0.77
TRAPPC9-212ENST00000521944 ATP9AO75110 1047 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 CXCL14O95715 111 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 SRFP11831 508 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 INSRRP14616 1297 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 JUNDP17535 347 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 TCF7P36402 384 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 IGBP1P78318 339 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 NFX1Q12986 1120 aaKnown RBP10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 WTAPQ15007 396 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 ALX1Q15699 326 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 LETM2Q2VYF4 491 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 CCDC149Q6ZUS6 474 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 TMEM173Q86WV6 379 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 TRAPPC12Q8WVT3 735 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 MTMR8Q96EF0 704 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 PCYT2Q99447 389 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZKSCAN3Q9BRR0 538 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 PRDM9Q9NQV7 894 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZBTB40Q9NUA8 1239 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 DZANK1Q9NVP4 752 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 MAP3K20Q9NYL2 800 aaKnown RBP10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 PCDHGA2Q9Y5H1 932 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 PCDHA1Q9Y5I3 950 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 BAZ2BQ9UIF8 2168 aaKnown RBP10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 UNC79Q9P2D8 2635 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 FRMPD4Q14CM0 1322 aa10.26□□□□□ -0.77
TRAPPC9-212ENST00000521944 IGSF10Q6WRI0 2623 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 F5P12259 2224 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 FGAP02671 866 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 PROS1P07225 676 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 PRKCSHP14314 528 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 STARD6P59095 220 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 KRT17Q04695 432 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 DMWDQ09019 674 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 DSC3Q14574 896 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 N4BP2L1Q5TBK1 243 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 FCHSD1Q86WN1 690 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 STAG2Q8N3U4 1231 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 ST13P5Q8NFI4 369 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 BORCS6Q96GS4 357 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZNF558Q96NG5 402 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 MYADMQ96S97 322 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 SENP7Q9BQF6 1050 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 LRRCC1Q9C099 1032 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 TMEM117Q9H0C3 514 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZBP1Q9H171 429 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 ARHGEF3Q9NR81 526 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 TOMM22Q9NS69 142 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 TMEM161AQ9NX61 479 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 FBXO4Q9UKT5 387 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 ST3GAL5Q9UNP4 418 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 FCF1Q9Y324 198 aaKnown RBP10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 PCDHA2Q9Y5H9 948 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 IRAK3Q9Y616 596 aa10.25□□□□□ -0.77
TRAPPC9-212ENST00000521944 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 NT5C1B-RDH14C9J2C7 533 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 FIBPO43427 364 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 GDF9O60383 454 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 HMMRO75330 724 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 PPM1AP35813 382 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 SLC19A1P41440 591 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 CSTF1Q05048 431 aaKnown RBP10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 SPEM2Q0P670 501 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 CLLU1OSQ5K130 101 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 DESI1Q6ICB0 168 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 TSSK4Q6SA08 328 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 CABP7Q86V35 215 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 VPS52Q8N1B4 723 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 PNMA1Q8ND90 353 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 PRR7Q8TB68 274 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 NETO1Q8TDF5 533 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 ATRIPQ8WXE1 791 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 RPP25Q9BUL9 199 aaKnown RBP10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 DDX23Q9BUQ8 820 aaKnown RBP10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 VN1R3Q9BXE9 311 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 AMNQ9BXJ7 453 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 ELAC1Q9H777 363 aaKnown RBP10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 ATP6V0A4Q9HBG4 840 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 C1orf112Q9NSG2 853 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZSCAN32Q9NX65 697 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 ERAP1Q9NZ08 941 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 EPS15L1Q9UBC2 864 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZMIZ1Q9ULJ6 1067 aa10.24□□□□□ -0.77
TRAPPC9-212ENST00000521944 DOCK6Q96HP0 2047 aa10.23□□□□□ -0.77
TRAPPC9-212ENST00000521944 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms