RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 MIER3Q7Z3K6 550 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 NECAB2Q7Z6G3 386 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 SESTD1Q86VW0 696 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 CCDC60Q8IWA6 550 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-210ENST00000521932 PAWRQ96IZ0 340 aaKnown RBP9.36□□□□□ -0.91
VPS13B-210ENST00000521932 AK8Q96MA6 479 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 GLT1D1Q96MS3 346 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 KATNAL1Q9BW62 490 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 RAB34Q9BZG1 259 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 SCAND2PQ9GZW5 306 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-210ENST00000521932 RNPEPQ9H4A4 650 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 C11orf49Q9H6J7 331 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 AZI2Q9H6S1 392 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 ZNF302Q9NR11 478 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 ERAP1Q9NZ08 941 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 LRWD1Q9UFC0 647 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 FBXO2Q9UK22 296 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-210ENST00000521932 SAMM50Q9Y512 469 aa9.36□□□□□ -0.91
VPS13B-210ENST00000521932 GRIN2DO15399 1336 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 IGSF9BQ9UPX0 1349 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 VWA3AA6NCI4 1184 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 LYPLA2O95372 231 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 SPATA31C1P0DKV0 1188 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 ATP4AP20648 1035 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 RPA1P27694 616 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 MARCKSP29966 332 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 HOXC8P31273 242 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 QARSP47897 775 aaKnown RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 CDK7P50613 346 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 PSMC5P62195 406 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 PTPN11Q06124 597 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 ITGA7Q13683 1181 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 SNX17Q15036 470 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 FOXD4L6Q3SYB3 417 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 NFRKBQ6P4R8 1299 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 FOXD4L3Q6VB84 417 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 SLC39A5Q6ZMH5 540 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 CATSPER3Q86XQ3 398 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 C4orf19Q8IY42 314 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 NEK9Q8TD19 979 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 KCNG4Q8TDN1 519 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 DIS3LQ8TF46 1054 aaKnown RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 GLG1Q92896 1179 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 TNPO1Q92973 898 aaKnown RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 ATP6V0A1Q93050 837 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 ZNF837Q96EG3 531 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 UCN2Q96RP3 112 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 EIF2AK1Q9BQI3 630 aaKnown RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 MMTAG2Q9BU76 263 aaKnown RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 POLR3CQ9BUI4 534 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 SENP6Q9GZR1 1112 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 DOCK5Q9H7D0 1870 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 ETNK1Q9HBU6 452 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 STARD7Q9NQZ5 370 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 GABBR1Q9UBS5 961 aa9.35□□□□□ -0.91
VPS13B-210ENST00000521932 ZNF215Q9UL58 517 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-210ENST00000521932 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.34□□□□□ -0.91
VPS13B-210ENST00000521932 A0A0U1RQG5 324 aaPredicted RBP9.34□□□□□ -0.91
VPS13B-210ENST00000521932 ARVCFO00192 962 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 BACH1O14867 736 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 SLC26A4O43511 780 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 ZNF862O60290 1169 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 DKC1O60832 514 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS13B-210ENST00000521932 STBD1O95210 358 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 ZNF286BP0CG31 522 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 XRCC6P12956 609 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS13B-210ENST00000521932 SOX10P56693 466 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 ADAM17P78536 824 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 GRIN1Q05586 938 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 PLCB4Q15147 1175 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 STK38Q15208 465 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 DBN1Q16643 649 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 KIAA0753Q2KHM9 967 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 XKR3Q5GH77 459 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 HYIQ5T013 277 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 AXDND1Q5T1B0 1012 aaPredicted RBP9.34□□□□□ -0.91
VPS13B-210ENST00000521932 UTP14CQ5TAP6 766 aaKnown RBP9.34□□□□□ -0.91
VPS13B-210ENST00000521932 KRT79Q5XKE5 535 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 HAUS3Q68CZ6 603 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 CLEC17AQ6ZS10 378 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 TRIM50Q86XT4 487 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 PLPP7Q8NBV4 271 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 ERMNQ8TAM6 284 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 ATP8B4Q8TF62 1192 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 DYDC2Q96IM9 177 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 CHAMP1Q96JM3 812 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 TOX2Q96NM4 488 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 NIFKQ9BYG3 293 aaKnown RBP9.34□□□□□ -0.91
VPS13B-210ENST00000521932 CCSER1Q9C0I3 900 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 CSRNP2Q9H175 543 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 ZSWIM4Q9H7M6 989 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 TUFT1Q9NNX1 390 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 NRBP2Q9NSY0 501 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 RGL1Q9NZL6 768 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 WRAP73Q9P2S5 460 aaPredicted RBP9.34□□□□□ -0.91
VPS13B-210ENST00000521932 DYRK1BQ9Y463 629 aa9.34□□□□□ -0.91
VPS13B-210ENST00000521932 KIAA0100Q14667 2235 aaKnown RBP9.33□□□□□ -0.92
VPS13B-210ENST00000521932 NRCAMQ92823 1304 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 MYH15Q9Y2K3 1946 aa9.33□□□□□ -0.92
VPS13B-210ENST00000521932 HBP1O60381 514 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms