RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SLFN12LQ6IEE8 588 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 TTLL7Q6ZT98 887 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 EP400NLQ6ZTU2 488 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 GAREM2Q75VX8 874 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 CABP7Q86V35 215 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 C7orf31Q8N865 590 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 ZBTB34Q8NCN2 500 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 OR2I1PQ8NGU4 316 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 MORC4Q8TE76 937 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 AUTS2Q8WXX7 1259 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 HOXB13Q92826 284 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 TOE1Q96GM8 510 aaKnown RBP4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 KIRREL1Q96J84 757 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 TUBGCP5Q96RT8 1024 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 DMRTA2Q96SC8 542 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 TMEM60Q9H2L4 133 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 KCNK12Q9HB15 430 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 MAN1C1Q9NR34 630 aa4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGN1P28-201ENST00000521340 TPP1O14773 563 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 N4BP3O15049 544 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 OFD1O75665 1012 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 EIF3JO75822 258 aaKnown RBP4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 ZBED1O96006 694 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 LDHAP00338 332 aaKnown RBP4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 ALDH2P05091 517 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 C8BP07358 591 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 MYBP10242 640 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 MTHFD2P13995 350 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 STAT5AP42229 794 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 ECE1P42892 770 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 MCAMP43121 646 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 RAP1GAPP47736 663 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 NEK3P51956 506 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 AGFG1P52594 562 aaKnown RBP4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 MALLQ13021 153 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 MORC3Q14149 939 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 C3orf36Q3SXR2 165 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 COBLL1Q53SF7 1204 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 SWSAP1Q6NVH7 229 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 AMIGO3Q86WK7 504 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 SPICE1Q8N0Z3 855 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 IGDCC4Q8TDY8 1250 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 ERCC4Q92889 916 aaPredicted RBP4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 E2F7Q96AV8 911 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 C1GALT1C1Q96EU7 318 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 MVB12AQ96EY5 273 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 IL17RAQ96F46 866 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 INTS4Q96HW7 963 aaKnown RBP4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 BTBD2Q9BX70 525 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 RNF38Q9H0F5 515 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 CSRNP2Q9H175 543 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 MTG2Q9H4K7 406 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 MYH16Q9H6N6 1097 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 INCENPQ9NQS7 918 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 KCNG1Q9UIX4 513 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 RCAN3Q9UKA8 241 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 NUDT5Q9UKK9 219 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 L1RE1Q9UN81 338 aa4.46□□□□□ -1.7
HMGN1P28-201ENST00000521340 HRKO00198 91 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 TSPAN15O95858 294 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 MPOP05164 745 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 ENO2P09104 434 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 COL6A1P12109 1028 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 ATF2P15336 505 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 ARL4AP40617 200 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 ALDH5A1P51649 535 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 SLC5A3P53794 718 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 KIF23Q02241 960 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 ROM1Q03395 351 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 ADAM9Q13443 819 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 HDAC1Q13547 482 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 SEMA5AQ13591 1074 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 SEPT2Q15019 361 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 SAFBQ15424 915 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 TIGD7Q6NT04 549 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 LCNL1Q6ZST4 164 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 SYDE1Q6ZW31 735 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 COL23A1Q86Y22 540 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 PPM1NQ8N819 430 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 HIPK4Q8NE63 616 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 OR14C36Q8NHC7 312 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 ABHD4Q8TB40 342 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 FAM193BQ96PV7 902 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 MPHOSPH6Q99547 160 aaKnown RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 ZNF552Q9H707 407 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 USP25Q9UHP3 1055 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 SAP30BPQ9UHR5 308 aaKnown RBP4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 TAGLN3Q9UI15 199 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 PCDHB1Q9Y5F3 818 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 COMMD10Q9Y6G5 202 aa4.45□□□□□ -1.7
HMGN1P28-201ENST00000521340 A0A1W2PQJ5 194 aa4.44□□□□□ -1.7
HMGN1P28-201ENST00000521340 KLRG2A4D1S0 409 aaPredicted RBP4.44□□□□□ -1.7
HMGN1P28-201ENST00000521340 CCDC154A6NI56 674 aa4.44□□□□□ -1.7
HMGN1P28-201ENST00000521340 NUDT19A8MXV4 375 aa4.44□□□□□ -1.7
HMGN1P28-201ENST00000521340 PMM2O15305 246 aa4.44□□□□□ -1.7
HMGN1P28-201ENST00000521340 B3GALT2O43825 422 aa4.44□□□□□ -1.7
HMGN1P28-201ENST00000521340 PLIN1O60240 522 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms