RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 UNC45AQ9H3U1 944 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 VPS54Q9P1Q0 977 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 SNX14Q9Y5W7 946 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 EVPLQ92817 2033 aa16.77■□□□□ 0.27
PRKDC-204ENST00000521331 C2orf71A6NGG8 1288 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 PSMA5P28066 241 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 DNM2P50570 870 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 NLRP5P59047 1200 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 Q4G0T1 1027 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 XKR3Q5GH77 459 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 TMEM169Q96HH4 297 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 TRAIPQ9BWF2 469 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 NIFKQ9BYG3 293 aaKnown RBP16.76■□□□□ 0.27
PRKDC-204ENST00000521331 IRF2BPLQ9H1B7 796 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 ADAM7Q9H2U9 754 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 HCFC2Q9Y5Z7 792 aa16.76■□□□□ 0.27
PRKDC-204ENST00000521331 CACNA1HO95180 2353 aa16.75■□□□□ 0.27
PRKDC-204ENST00000521331 EDIL3O43854 480 aa16.75■□□□□ 0.27
PRKDC-204ENST00000521331 PSMD10O75832 226 aa16.75■□□□□ 0.27
PRKDC-204ENST00000521331 SKIP12755 728 aa16.75■□□□□ 0.27
PRKDC-204ENST00000521331 FGFR4P22455 802 aa16.75■□□□□ 0.27
PRKDC-204ENST00000521331 SFPQP23246 707 aaKnown RBP eCLIP16.75■□□□□ 0.27
PRKDC-204ENST00000521331 BCAR1P56945 870 aa16.75■□□□□ 0.27
PRKDC-204ENST00000521331 TCF15Q12870 199 aa16.75■□□□□ 0.27
PRKDC-204ENST00000521331 MIER3Q7Z3K6 550 aa16.75■□□□□ 0.27
PRKDC-204ENST00000521331 TBCKQ8TEA7 893 aa16.75■□□□□ 0.27
PRKDC-204ENST00000521331 INO80BQ9C086 356 aaPredicted RBP16.75■□□□□ 0.27
PRKDC-204ENST00000521331 SEPT9Q9UHD8 586 aaPredicted RBP16.75■□□□□ 0.27
PRKDC-204ENST00000521331 CYP3A7-CYP3A51PA0A087WV96 503 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 IGKV6-21A0A0C4DH24 114 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 CLASP2O75122 1294 aaKnown RBP16.74■□□□□ 0.27
PRKDC-204ENST00000521331 CYP3A7P24462 503 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 PDIA3P30101 505 aaKnown RBP16.74■□□□□ 0.27
PRKDC-204ENST00000521331 AVPR2P30518 371 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 PHKA2P46019 1235 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 NUBP1P53384 320 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 EVCP57679 992 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 DRP2Q13474 957 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 GIT2Q14161 759 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 MTERF2Q49AM1 385 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 ZNF410Q86VK4 478 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 TRIM22Q8IYM9 498 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 UBALD2Q8IYN6 164 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 TMEM87AQ8NBN3 555 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 RIPOR3Q96MK2 946 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 PHOX2BQ99453 314 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 TSHZ2Q9NRE2 1034 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 DZANK1Q9NVP4 752 aa16.74■□□□□ 0.27
PRKDC-204ENST00000521331 MYH9P35579 1960 aaKnown RBP16.74■□□□□ 0.27
PRKDC-204ENST00000521331 CSDE1O75534 798 aaKnown RBP16.73■□□□□ 0.27
PRKDC-204ENST00000521331 CXCL14O95715 111 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 SP100P23497 879 aaPredicted RBP16.73■□□□□ 0.27
PRKDC-204ENST00000521331 CA8P35219 290 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 MTHFRP42898 656 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 POLGP54098 1239 aaPredicted RBP16.73■□□□□ 0.27
PRKDC-204ENST00000521331 VCPP55072 806 aaKnown RBP16.73■□□□□ 0.27
PRKDC-204ENST00000521331 CCT2P78371 535 aaKnown RBP16.73■□□□□ 0.27
PRKDC-204ENST00000521331 MTMR3Q13615 1198 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 TWF2Q6IBS0 349 aaKnown RBP16.73■□□□□ 0.27
PRKDC-204ENST00000521331 GLB1LQ6UWU2 654 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 B3GNT9Q6UX72 402 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 FAM177A1Q8N128 213 aaPredicted RBP16.73■□□□□ 0.27
PRKDC-204ENST00000521331 VPS52Q8N1B4 723 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 KREMEN2Q8NCW0 462 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 CEP89Q96ST8 783 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 JPH2Q9BR39 696 aaPredicted RBP16.73■□□□□ 0.27
PRKDC-204ENST00000521331 POMKQ9H5K3 350 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 PCDHA4Q9UN74 947 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 SORCS3Q9UPU3 1222 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 IRAK3Q9Y616 596 aa16.73■□□□□ 0.27
PRKDC-204ENST00000521331 A0A087WZ62 844 aa16.72■□□□□ 0.27
PRKDC-204ENST00000521331 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.72■□□□□ 0.27
PRKDC-204ENST00000521331 NT5C1B-RDH14C9J2C7 533 aa16.72■□□□□ 0.27
PRKDC-204ENST00000521331 ZC3H11AO75152 810 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRKDC-204ENST00000521331 RAB27AP51159 221 aa16.72■□□□□ 0.27
PRKDC-204ENST00000521331 SSRP1Q08945 709 aaKnown RBP16.72■□□□□ 0.27
PRKDC-204ENST00000521331 MOXD1Q6UVY6 613 aa16.72■□□□□ 0.27
PRKDC-204ENST00000521331 DDX53Q86TM3 631 aaKnown RBP16.72■□□□□ 0.27
PRKDC-204ENST00000521331 GJA10Q969M2 543 aa16.72■□□□□ 0.27
PRKDC-204ENST00000521331 FDXACB1Q9BRP7 624 aaPredicted RBP16.72■□□□□ 0.27
PRKDC-204ENST00000521331 ZBP1Q9H171 429 aa16.72■□□□□ 0.27
PRKDC-204ENST00000521331 NCOA5Q9HCD5 579 aaKnown RBP16.72■□□□□ 0.27
PRKDC-204ENST00000521331 SUCLA2Q9P2R7 463 aaPredicted RBP16.72■□□□□ 0.27
PRKDC-204ENST00000521331 STK39Q9UEW8 545 aa16.72■□□□□ 0.27
PRKDC-204ENST00000521331 PIN4Q9Y237 131 aaKnown RBP16.72■□□□□ 0.27
PRKDC-204ENST00000521331 DDX11L8A8MPP1 907 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 C2CD4DB7Z1M9 353 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 MAFO75444 373 aaPredicted RBP16.71■□□□□ 0.27
PRKDC-204ENST00000521331 REC8O95072 547 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 STBD1O95210 358 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 DEXIO95424 95 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 TDP2O95551 362 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 CTSAP10619 480 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 PSMC5P62195 406 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 NOMO2Q5JPE7 1267 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 GALNT17Q6IS24 598 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 CATSPER4Q7RTX7 472 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 RHPN2Q8IUC4 686 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 BLIDQ8IZY5 108 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 DAGLBQ8NCG7 672 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms