RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, human

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS13B-208	ENST00000521037	ZNF605	Q86T29	641 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	NT5DC4	Q86YG4	428 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	FBF1	Q8TES7	1133 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	SOCS4	Q8WXH5	440 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	FERMT2	Q96AC1	680 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	DACT3	Q96B18	629 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	INTS4	Q96HW7	963 aa	Known RBP	4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	TGIF2	Q9GZN2	237 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	MRS2	Q9HD23	443 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	DDX4	Q9NQI0	724 aa	Known RBP	4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	CNOT6	Q9ULM6	557 aa	Known RBP	4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	CEP131	Q9UPN4	1083 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	KCTD3	Q9Y597	815 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	ACACB	O00763	2458 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	MYH3	P11055	1940 aa		4.87	□□□□□ -1.63
VPS13B-208	ENST00000521037	COL4A4	P53420	1690 aa	Predicted RBP	4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	FITM1	A5D6W6	292 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	PRR23A	A6NEV1	266 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	CYSRT1	A8MQ03	144 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	SORBS3	O60504	671 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	LDHB	P07195	334 aa	Known RBP	4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	HOXB7	P09629	217 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	AR	P10275	920 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	PPP2R1A	P30153	589 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	HOXA7	P31268	230 aa	Predicted RBP	4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	DAB2	P98082	770 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	FANCC	Q00597	558 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	ATP2B2	Q01814	1243 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	TAP1	Q03518	808 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	EGR3	Q06889	387 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	TCP10	Q12799	353 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	GRB10	Q13322	594 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	CWF19L2	Q2TBE0	894 aa	Known RBP	4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	FAM47A	Q5JRC9	791 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	TCERG1L	Q5VWI1	586 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	SLC6A19	Q695T7	634 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	HHIPL2	Q6UWX4	724 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	SV2B	Q7L1I2	683 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	NOP9	Q86U38	636 aa	Known RBP	4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	NEK9	Q8TD19	979 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	PANK1	Q8TE04	598 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	LINC01599	Q8WXQ3	324 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	TMEM87B	Q96K49	555 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	UIMC1	Q96RL1	719 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	DPH2	Q9BQC3	489 aa	Predicted RBP	4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	TANGO6	Q9C0B7	1094 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	PARP2	Q9UGN5	583 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	UMODL1	Q5DID0	1318 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	ZNF521	Q96K83	1311 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	GCN1	Q92616	2671 aa	Known RBP	4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	SIPA1L1	O43166	1804 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037	ZNF236	Q9UL36	1845 aa		4.86	□□□□□ -1.63
VPS13B-208	ENST00000521037		A0A1W2PQ45	241 aa	Predicted RBP	4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037		A0A1W2PQY0	241 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	CTNND1	O60716	968 aa	Known RBP	4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	CD4	P01730	458 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	ALAD	P13716	330 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	SLC5A1	P13866	664 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	RAG1	P15918	1043 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	RGS2	P41220	211 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	HMGCS2	P54868	508 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	VCP	P55072	806 aa	Known RBP	4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	HERVK_113	P62684	666 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	SPP2	Q13103	211 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	GRB14	Q14449	540 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	RAB30	Q15771	203 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	ZNF385B	Q569K4	471 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	PRAMEF19	Q5SWL8	479 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	DPH6	Q7L8W6	267 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	ZNF804A	Q7Z570	1209 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	MCAT	Q8IVS2	390 aa	Known RBP	4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	OXR1	Q8N573	874 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	VGLL2	Q8N8G2	317 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	DTWD2	Q8NBA8	298 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	TMEM87A	Q8NBN3	555 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	SLC44A5	Q8NCS7	719 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	RNF34	Q969K3	372 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	TEKT1	Q969V4	418 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	RMDN1	Q96DB5	314 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	DUSP9	Q99956	384 aa	Known RBP	4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	G6PC3	Q9BUM1	346 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	CCSER2	Q9H7U1	834 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	HYPK	Q9NX55	129 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	PCDHB5	Q9Y5E4	795 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	DOCK2	Q92608	1830 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	RIF1	Q5UIP0	2472 aa	Known RBP	4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	ITPR1	Q14643	2758 aa		4.85	□□□□□ -1.63
VPS13B-208	ENST00000521037	ROBO3	Q96MS0	1386 aa		4.84	□□□□□ -1.63
VPS13B-208	ENST00000521037	MYADML2	A6NDP7	307 aa		4.84	□□□□□ -1.63
VPS13B-208	ENST00000521037	OTOL1	A6NHN0	477 aa	Predicted RBP	4.84	□□□□□ -1.63
VPS13B-208	ENST00000521037	CTAGE5	O15320	804 aa		4.84	□□□□□ -1.63
VPS13B-208	ENST00000521037	SEPT4	O43236	478 aa		4.84	□□□□□ -1.63
VPS13B-208	ENST00000521037	PSPN	O60542	156 aa		4.84	□□□□□ -1.63
VPS13B-208	ENST00000521037	MSC	O60682	206 aa		4.84	□□□□□ -1.63
VPS13B-208	ENST00000521037	PQBP1	O60828	265 aa	Known RBP	4.84	□□□□□ -1.63
VPS13B-208	ENST00000521037	ZNF853	P0CG23	659 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms