RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 SPIRE1Q08AE8 756 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 ST3GAL1Q11201 340 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 EPHA7Q15375 998 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 CLUL1Q15846 466 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 CLLU1OSQ5K130 101 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 ZNF598Q86UK7 904 aaKnown RBP11.77□□□□□ -0.53
EXTL3-208ENST00000520940 SLFN12Q8IYM2 578 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 RNF169Q8NCN4 708 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 SLC7A3Q8WY07 619 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 CEP170P1Q96L14 293 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 NLRP4Q96MN2 994 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 EPHX3Q9H6B9 360 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 TLR9Q9NR96 1032 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 PPME1Q9Y570 386 aa11.77□□□□□ -0.53
EXTL3-208ENST00000520940 BTBD18B2RXH4 712 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 BAG4O95429 457 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 EOMESO95936 686 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 CENPBP07199 599 aaPredicted RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 COL9A1P20849 921 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 YWHABP31946 246 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 SSTR3P32745 418 aaPredicted RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 RFC5P40937 340 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 NRIP1P48552 1158 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 NDUFV1P49821 464 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 POLGP54098 1239 aaPredicted RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 ZP2Q05996 745 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 SMAD4Q13485 552 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 TRIM29Q14134 588 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 TWF2Q6IBS0 349 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 LRRC55Q6ZSA7 311 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 KSR1Q8IVT5 923 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 C4orf19Q8IY42 314 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 DIS3L2Q8IYB7 885 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 EXOC8Q8IYI6 725 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 GJD3Q8N144 294 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 EFHBQ8N7U6 833 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 PSPC1Q8WXF1 523 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 DYDC2Q96IM9 177 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 DHX33Q9H6R0 707 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 CHST12Q9NRB3 414 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 RGL1Q9NZL6 768 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 PRKAG3Q9UGI9 489 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 CD207Q9UJ71 328 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 PIN4Q9Y237 131 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 COL4A3BPQ9Y5P4 624 aa11.76□□□□□ -0.53
EXTL3-208ENST00000520940 TDRD15B5MCY1 1934 aaKnown RBP11.76□□□□□ -0.53
EXTL3-208ENST00000520940 WNT7AO00755 349 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 FSCN2O14926 492 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 MBTPS2O43462 519 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 GLP2RO95838 553 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 PPM1AP35813 382 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 PBX3P40426 434 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 PHKA2P46019 1235 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 CYP4A11Q02928 519 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 ADAM15Q13444 863 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 CTTNQ14247 550 aaKnown RBP11.75□□□□□ -0.53
EXTL3-208ENST00000520940 EMC2Q15006 297 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 SMAD2Q15796 467 aaKnown RBP11.75□□□□□ -0.53
EXTL3-208ENST00000520940 CALCRLQ16602 461 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 KCNT2Q6UVM3 1135 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 CATSPER4Q7RTX7 472 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 RBM23Q86U06 439 aaKnown RBP11.75□□□□□ -0.53
EXTL3-208ENST00000520940 ADHFE1Q8IWW8 467 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 TMEM143Q96AN5 459 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 MSLNLQ96KJ4 702 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 ZNF558Q96NG5 402 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 MRPL9Q9BYD2 267 aaKnown RBP11.75□□□□□ -0.53
EXTL3-208ENST00000520940 INO80BQ9C086 356 aaPredicted RBP11.75□□□□□ -0.53
EXTL3-208ENST00000520940 ZSWIM4Q9H7M6 989 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 IFT122Q9HBG6 1241 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
EXTL3-208ENST00000520940 LZTS1Q9Y250 596 aa11.75□□□□□ -0.53
EXTL3-208ENST00000520940 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 GAS2O43903 313 aaKnown RBP11.74□□□□□ -0.53
EXTL3-208ENST00000520940 NEMFO60524 1076 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 ERVFC1P60507 584 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 PLCB3Q01970 1234 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 LAMTOR4Q0VGL1 99 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 PLPP4Q5VZY2 271 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 PDE12Q6L8Q7 609 aaKnown RBP11.74□□□□□ -0.53
EXTL3-208ENST00000520940 OTUD6AQ7L8S5 288 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 SMRP1Q8NCR6 262 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
EXTL3-208ENST00000520940 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
EXTL3-208ENST00000520940 TRAIPQ9BWF2 469 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 TLE6Q9H808 572 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 ENTPD7Q9NQZ7 604 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 AGPAT5Q9NUQ2 364 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 CLEC1BQ9P126 229 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 BARX2Q9UMQ3 279 aaPredicted RBP11.74□□□□□ -0.53
EXTL3-208ENST00000520940 LIMCH1Q9UPQ0 1083 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 MUC6Q6W4X9 2439 aa11.74□□□□□ -0.53
EXTL3-208ENST00000520940 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
EXTL3-208ENST00000520940 PI4K2BG5E9Z4 385 aa11.73□□□□□ -0.53
EXTL3-208ENST00000520940 ZBTB39O15060 712 aa11.73□□□□□ -0.53
EXTL3-208ENST00000520940 EYA4O95677 639 aa11.73□□□□□ -0.53
EXTL3-208ENST00000520940 SRGAP2CP0DJJ0 459 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms