RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 SYCP3Q8IZU3 236 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 KRT222Q8N1A0 295 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 BANK1Q8NDB2 785 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 ATP6V0A1Q93050 837 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 INPP4AQ96PE3 977 aaPredicted RBP10.87□□□□□ -0.67
SPARC-202ENST00000520687 TMEM106CQ9BVX2 250 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 MOV10L1Q9BXT6 1211 aaKnown RBP10.87□□□□□ -0.67
SPARC-202ENST00000520687 LACRTQ9GZZ8 138 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 ACAD9Q9H845 621 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 ARFGAP3Q9NP61 516 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 FBXO40Q9UH90 709 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 RAB21Q9UL25 225 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 PCDHA10Q9Y5I2 948 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 PARP14Q460N5 1801 aa10.87□□□□□ -0.67
SPARC-202ENST00000520687 TARSL2A2RTX5 802 aaKnown RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 ZNF263O14978 683 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 PSAPP07602 524 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 EIF2AK2P19525 551 aaKnown RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 YWHABP31946 246 aaKnown RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 CLCN6P51797 869 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 GTF2BQ00403 316 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 CYP27A1Q02318 531 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 MAPK7Q13164 816 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 BAATQ14032 418 aaPredicted RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 SNRNP48Q6IEG0 339 aaKnown RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 NSMFQ6X4W1 530 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 ZNF572Q7Z3I7 529 aaPredicted RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 DNERQ8NFT8 737 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 IL31RAQ8NI17 732 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 SPIRE2Q8WWL2 714 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 KIFAP3Q92845 792 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 ATG4CQ96DT6 458 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 NLRC4Q9NPP4 1024 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 USP20Q9Y2K6 914 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 STXBP5LQ9Y2K9 1186 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 AFG3L2Q9Y4W6 797 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 LOXHD1Q8IVV2 1947 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 ZMYM2Q9UBW7 1377 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 A0A0U1RQJ8 604 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 NKRFO15226 690 aaKnown RBP eCLIP10.86□□□□□ -0.67
SPARC-202ENST00000520687 ZRANB2O95218 330 aaKnown RBP eCLIP10.86□□□□□ -0.67
SPARC-202ENST00000520687 MYCLP12524 364 aaPredicted RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 COPB2P35606 906 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 STAT1P42224 750 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 RAPGEF1Q13905 1077 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 NAB2Q15742 525 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 TCERG1LQ5VWI1 586 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 DPY19L2P1Q6NXN4 242 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 SLC30A10Q6XR72 485 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 USP37Q86T82 979 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 RASAL3Q86YV0 1011 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 LRRN4CLQ8ND94 238 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 MCPH1Q8NEM0 835 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.86□□□□□ -0.67
SPARC-202ENST00000520687 LMBR1Q8WVP7 490 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 ATRIPQ8WXE1 791 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 KCNN1Q92952 543 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 NTPCRQ9BSD7 190 aaKnown RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 PARD6BQ9BYG5 372 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 STK33Q9BYT3 514 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 RNF39Q9H2S5 420 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 HOMER2Q9NSB8 354 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 WRAP73Q9P2S5 460 aaPredicted RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 ZNF214Q9UL59 606 aaPredicted RBP10.86□□□□□ -0.67
SPARC-202ENST00000520687 SNX12Q9UMY4 172 aa10.86□□□□□ -0.67
SPARC-202ENST00000520687 PHIPQ8WWQ0 1821 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 PFASO15067 1338 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 RCCD1A6NED2 376 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 SFI1A8K8P3 1242 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 SPATA31C2B4DYI2 1134 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 K7ENM7 598 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 TLR2O60603 784 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 EXOC3O60645 756 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 ABL1P00519 1130 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 PLEKP08567 350 aaPredicted RBP10.85□□□□□ -0.67
SPARC-202ENST00000520687 COL9A1P20849 921 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 ICAM3P32942 547 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 FMO5P49326 533 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 HMGCS2P54868 508 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 NCKAP1LP55160 1127 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 JAM2P57087 298 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 DCAF17Q5H9S7 520 aaPredicted RBP10.85□□□□□ -0.67
SPARC-202ENST00000520687 WDR93Q6P2C0 686 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 IRF2BP2Q7Z5L9 587 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.85□□□□□ -0.67
SPARC-202ENST00000520687 DAW1Q8N136 415 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 CNKSR2Q8WXI2 1034 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 ZKSCAN4Q969J2 545 aaPredicted RBP10.85□□□□□ -0.67
SPARC-202ENST00000520687 ARMC5Q96C12 935 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 CRACR2AQ9BSW2 395 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 GGA3Q9NZ52 723 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 GCNT4Q9P109 453 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 HYOU1Q9Y4L1 999 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 PPME1Q9Y570 386 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 TRIM17Q9Y577 477 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 CEP290O15078 2479 aa10.85□□□□□ -0.67
SPARC-202ENST00000520687 ASTN2O75129 1339 aaPredicted RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 A0A0A6YYK5 440 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms