RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 A0A087WZ62 844 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 IGKV6-21A0A0C4DH24 114 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 EML1O00423 815 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 EOMESO95936 686 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 ATF7P17544 494 aaPredicted RBP17.03■□□□□ 0.32
CSMD1-207ENST00000520451 XBP1P17861 261 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 SFPQP23246 707 aaKnown RBP eCLIP17.03■□□□□ 0.32
CSMD1-207ENST00000520451 HERC4Q5GLZ8 1057 aaPredicted RBP17.03■□□□□ 0.32
CSMD1-207ENST00000520451 PLA2G4FQ68DD2 849 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 ANO5Q75V66 913 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 NEK8Q86SG6 692 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 ZNF598Q86UK7 904 aaKnown RBP17.03■□□□□ 0.32
CSMD1-207ENST00000520451 RHPN2Q8IUC4 686 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 FDXACB1Q9BRP7 624 aaPredicted RBP17.03■□□□□ 0.32
CSMD1-207ENST00000520451 PHF20Q9BVI0 1012 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 SPG21Q9NZD8 308 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 TRIOO75962 3097 aa17.03■□□□□ 0.32
CSMD1-207ENST00000520451 STK36Q9NRP7 1315 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 DTNBO60941 627 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 MAFO75444 373 aaPredicted RBP17.02■□□□□ 0.32
CSMD1-207ENST00000520451 NEFLP07196 543 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 SRGAP2BP0DMP2 458 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 KRT17Q04695 432 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 PPP2R5CQ13362 524 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 ZNF410Q86VK4 478 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 FAM20AQ96MK3 541 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 NLRP4Q96MN2 994 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 JPH2Q9BR39 696 aaPredicted RBP17.02■□□□□ 0.32
CSMD1-207ENST00000520451 KCNMB3Q9NPA1 279 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 NGRNQ9NPE2 291 aaKnown RBP17.02■□□□□ 0.32
CSMD1-207ENST00000520451 CHST12Q9NRB3 414 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 VAV3Q9UKW4 847 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 TPCN1Q9ULQ1 816 aa17.02■□□□□ 0.32
CSMD1-207ENST00000520451 PIN4Q9Y237 131 aaKnown RBP17.02■□□□□ 0.32
CSMD1-207ENST00000520451 HIDE1A8MVS5 230 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 PFKFB2O60825 505 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 GCFC2P16383 781 aaKnown RBP17.01■□□□□ 0.31
CSMD1-207ENST00000520451 PHKA2P46019 1235 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 QARSP47897 775 aaKnown RBP17.01■□□□□ 0.31
CSMD1-207ENST00000520451 TWF2Q6IBS0 349 aaKnown RBP17.01■□□□□ 0.31
CSMD1-207ENST00000520451 PPP4R3AQ6IN85 833 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 LLGL2Q6P1M3 1020 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 PIK3AP1Q6ZUJ8 805 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 TMC7Q7Z402 723 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 KSR1Q8IVT5 923 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 SLC39A11Q8N1S5 342 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 MRPL9Q9BYD2 267 aaKnown RBP17.01■□□□□ 0.31
CSMD1-207ENST00000520451 INO80BQ9C086 356 aaPredicted RBP17.01■□□□□ 0.31
CSMD1-207ENST00000520451 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 GJB4Q9NTQ9 266 aa17.01■□□□□ 0.31
CSMD1-207ENST00000520451 LOC730098B7Z3J9 87 aa17■□□□□ 0.31
CSMD1-207ENST00000520451 MARCH6O60337 910 aa17■□□□□ 0.31
CSMD1-207ENST00000520451 CCNT1O60563 726 aaKnown RBP17■□□□□ 0.31
CSMD1-207ENST00000520451 DKC1O60832 514 aaKnown RBP eCLIP17■□□□□ 0.31
CSMD1-207ENST00000520451 TECP42680 631 aa17■□□□□ 0.31
CSMD1-207ENST00000520451 NPEPPSP55786 919 aa17■□□□□ 0.31
CSMD1-207ENST00000520451 LONRF3Q496Y0 759 aa17■□□□□ 0.31
CSMD1-207ENST00000520451 CATSPER4Q7RTX7 472 aa17■□□□□ 0.31
CSMD1-207ENST00000520451 OXER1Q8TDS5 423 aa17■□□□□ 0.31
CSMD1-207ENST00000520451 SLC7A3Q8WY07 619 aa17■□□□□ 0.31
CSMD1-207ENST00000520451 PHF7Q9BWX1 381 aaPredicted RBP17■□□□□ 0.31
CSMD1-207ENST00000520451 MUC6Q6W4X9 2439 aa17■□□□□ 0.31
CSMD1-207ENST00000520451 NT5C1B-RDH14C9J2C7 533 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 P4HBP07237 508 aaKnown RBP16.99■□□□□ 0.31
CSMD1-207ENST00000520451 SKIP12755 728 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 ALDH7A1P49419 539 aaKnown RBP16.99■□□□□ 0.31
CSMD1-207ENST00000520451 BCAR1P56945 870 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 KCNC3Q14003 757 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 SMC1AQ14683 1233 aaKnown RBP16.99■□□□□ 0.31
CSMD1-207ENST00000520451 CBX2Q14781 532 aaPredicted RBP16.99■□□□□ 0.31
CSMD1-207ENST00000520451 ANKRD54Q6NXT1 300 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 TMEM184AQ6ZMB5 413 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 HFE2Q6ZVN8 426 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 SUSD6Q92537 303 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 LPPQ93052 612 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 RPGRIP1Q96KN7 1286 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 CEP170P1Q96L14 293 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 NAP1L4Q99733 375 aaKnown RBP16.99■□□□□ 0.31
CSMD1-207ENST00000520451 TRAIPQ9BWF2 469 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 APOL5Q9BWW9 433 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 WRAP73Q9P2S5 460 aaPredicted RBP16.99■□□□□ 0.31
CSMD1-207ENST00000520451 ORC3Q9UBD5 711 aaPredicted RBP16.99■□□□□ 0.31
CSMD1-207ENST00000520451 COL4A3BPQ9Y5P4 624 aa16.99■□□□□ 0.31
CSMD1-207ENST00000520451 TBX3O15119 743 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 ZC3H11AO75152 810 aaKnown RBP eCLIP16.98■□□□□ 0.31
CSMD1-207ENST00000520451 CTDNEP1O95476 244 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
CSMD1-207ENST00000520451 CA8P35219 290 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 RAB27AP51159 221 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 POLGP54098 1239 aaPredicted RBP16.98■□□□□ 0.31
CSMD1-207ENST00000520451 ANKRD1Q15327 319 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 NCAPH2Q6IBW4 605 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 GLB1LQ6UWU2 654 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 ZNF579Q8NAF0 562 aaKnown RBP16.98■□□□□ 0.31
CSMD1-207ENST00000520451 WASF1Q92558 559 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 EDAQ92838 391 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 HAS1Q92839 578 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 TMEM169Q96HH4 297 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 LXNQ9BS40 222 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms