RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 FBXL16Q8N461 479 aa22.55■■□□□ 1.2
HDAC2-207ENST00000520170 MRPL43Q8N983 215 aaKnown RBP22.55■■□□□ 1.2
HDAC2-207ENST00000520170 TBCKQ8TEA7 893 aa22.55■■□□□ 1.2
HDAC2-207ENST00000520170 CASP10Q92851 521 aa22.55■■□□□ 1.2
HDAC2-207ENST00000520170 AGXT2Q9BYV1 514 aa22.55■■□□□ 1.2
HDAC2-207ENST00000520170 GCOM2Q9BZD3 368 aaPredicted RBP22.55■■□□□ 1.2
HDAC2-207ENST00000520170 TMEM150BA6NC51 233 aa22.54■■□□□ 1.2
HDAC2-207ENST00000520170 PDIA3P30101 505 aaKnown RBP22.54■■□□□ 1.2
HDAC2-207ENST00000520170 BCAR1P56945 870 aa22.54■■□□□ 1.2
HDAC2-207ENST00000520170 TPRNQ4KMQ1 711 aa22.54■■□□□ 1.2
HDAC2-207ENST00000520170 ASIC4Q96FT7 647 aa22.54■■□□□ 1.2
HDAC2-207ENST00000520170 PRRX2Q99811 253 aa22.54■■□□□ 1.2
HDAC2-207ENST00000520170 SH2D3AQ9BRG2 576 aa22.54■■□□□ 1.2
HDAC2-207ENST00000520170 SH3GLB2Q9NR46 395 aa22.54■■□□□ 1.2
HDAC2-207ENST00000520170 HCFC2Q9Y5Z7 792 aa22.54■■□□□ 1.2
HDAC2-207ENST00000520170 C2orf71A6NGG8 1288 aa22.53■■□□□ 1.2
HDAC2-207ENST00000520170 PSMD10O75832 226 aa22.53■■□□□ 1.2
HDAC2-207ENST00000520170 CXCL14O95715 111 aa22.53■■□□□ 1.2
HDAC2-207ENST00000520170 LONRF3Q496Y0 759 aa22.53■■□□□ 1.2
HDAC2-207ENST00000520170 CES5AQ6NT32 575 aa22.53■■□□□ 1.2
HDAC2-207ENST00000520170 MRPL9Q9BYD2 267 aaKnown RBP22.53■■□□□ 1.2
HDAC2-207ENST00000520170 NIFKQ9BYG3 293 aaKnown RBP22.53■■□□□ 1.2
HDAC2-207ENST00000520170 A0A087WZ62 844 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 CLASP2O75122 1294 aaKnown RBP22.52■■□□□ 1.2
HDAC2-207ENST00000520170 TDP2O95551 362 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 PSMA5P28066 241 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 DNM2P50570 870 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 VCPP55072 806 aaKnown RBP22.52■■□□□ 1.2
HDAC2-207ENST00000520170 BMS1Q14692 1282 aaKnown RBP22.52■■□□□ 1.2
HDAC2-207ENST00000520170 Q4G0T1 1027 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 XKR3Q5GH77 459 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 RDM1Q8NG50 284 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 LPPQ93052 612 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 TMEM169Q96HH4 297 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 FDXACB1Q9BRP7 624 aaPredicted RBP22.52■■□□□ 1.2
HDAC2-207ENST00000520170 CHST12Q9NRB3 414 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 NR2E1Q9Y466 385 aa22.52■■□□□ 1.2
HDAC2-207ENST00000520170 DDX11L8A8MPP1 907 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 ZC3H11AO75152 810 aaKnown RBP eCLIP22.51■■□□□ 1.19
HDAC2-207ENST00000520170 STBD1O95210 358 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 PHKA2P46019 1235 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 CDC42EP1Q00587 391 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 SSRP1Q08945 709 aaKnown RBP22.51■■□□□ 1.19
HDAC2-207ENST00000520170 TCF15Q12870 199 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 TWF2Q6IBS0 349 aaKnown RBP22.51■■□□□ 1.19
HDAC2-207ENST00000520170 TRIM22Q8IYM9 498 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 VPS52Q8N1B4 723 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 TMEM87AQ8NBN3 555 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 C22orf23Q9BZE7 217 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 ADAM7Q9H2U9 754 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 POMKQ9H5K3 350 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 PCDHA4Q9UN74 947 aa22.51■■□□□ 1.19
HDAC2-207ENST00000520170 WEE2P0C1S8 567 aa22.5■■□□□ 1.19
HDAC2-207ENST00000520170 SFPQP23246 707 aaKnown RBP eCLIP22.5■■□□□ 1.19
HDAC2-207ENST00000520170 AVPR2P30518 371 aa22.5■■□□□ 1.19
HDAC2-207ENST00000520170 ITIH3Q06033 890 aa22.5■■□□□ 1.19
HDAC2-207ENST00000520170 RHPN2Q8IUC4 686 aa22.5■■□□□ 1.19
HDAC2-207ENST00000520170 KREMEN2Q8NCW0 462 aa22.5■■□□□ 1.19
HDAC2-207ENST00000520170 AUTS2Q8WXX7 1259 aa22.5■■□□□ 1.19
HDAC2-207ENST00000520170 CEP89Q96ST8 783 aa22.5■■□□□ 1.19
HDAC2-207ENST00000520170 SUCLA2Q9P2R7 463 aaPredicted RBP22.5■■□□□ 1.19
HDAC2-207ENST00000520170 PIN4Q9Y237 131 aaKnown RBP22.5■■□□□ 1.19
HDAC2-207ENST00000520170 CYP3A7-CYP3A51PA0A087WV96 503 aa22.49■■□□□ 1.19
HDAC2-207ENST00000520170 IGKV6-21A0A0C4DH24 114 aa22.49■■□□□ 1.19
HDAC2-207ENST00000520170 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.49■■□□□ 1.19
HDAC2-207ENST00000520170 C2CD4DB7Z1M9 353 aa22.49■■□□□ 1.19
HDAC2-207ENST00000520170 CYP3A7P24462 503 aa22.49■■□□□ 1.19
HDAC2-207ENST00000520170 EVCP57679 992 aa22.49■■□□□ 1.19
HDAC2-207ENST00000520170 RARS2Q5T160 578 aaKnown RBP22.49■■□□□ 1.19
HDAC2-207ENST00000520170 TMEM173Q86WV6 379 aaPredicted RBP22.49■■□□□ 1.19
HDAC2-207ENST00000520170 KSR1Q8IVT5 923 aa22.49■■□□□ 1.19
HDAC2-207ENST00000520170 BLIDQ8IZY5 108 aa22.49■■□□□ 1.19
HDAC2-207ENST00000520170 C12orf76Q8N812 135 aaPredicted RBP22.49■■□□□ 1.19
HDAC2-207ENST00000520170 NECTIN4Q96NY8 510 aa22.49■■□□□ 1.19
HDAC2-207ENST00000520170 INO80BQ9C086 356 aaPredicted RBP22.49■■□□□ 1.19
HDAC2-207ENST00000520170 INPP5FQ9Y2H2 1132 aa22.49■■□□□ 1.19
HDAC2-207ENST00000520170 PDGFBP01127 241 aaPredicted RBP22.48■■□□□ 1.19
HDAC2-207ENST00000520170 SKIP12755 728 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 KANK3Q6NY19 840 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 GLB1LQ6UWU2 654 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 B3GNT9Q6UX72 402 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 CATSPER4Q7RTX7 472 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 RIPOR3Q96MK2 946 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 NLRP4Q96MN2 994 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 LARP6Q9BRS8 491 aaKnown RBP22.48■■□□□ 1.19
HDAC2-207ENST00000520170 ZBP1Q9H171 429 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 NRDE2Q9H7Z3 1164 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 FAM86C1Q9NVL1 165 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 CACNA1HO95180 2353 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 USP34Q70CQ2 3546 aa22.48■■□□□ 1.19
HDAC2-207ENST00000520170 MEIS3P2A8K0S8 358 aa22.47■■□□□ 1.19
HDAC2-207ENST00000520170 CPLX1O14810 134 aa22.47■■□□□ 1.19
HDAC2-207ENST00000520170 MAFO75444 373 aaPredicted RBP22.47■■□□□ 1.19
HDAC2-207ENST00000520170 REC8O95072 547 aa22.47■■□□□ 1.19
HDAC2-207ENST00000520170 MTHFRP42898 656 aa22.47■■□□□ 1.19
HDAC2-207ENST00000520170 RNASELQ05823 741 aaKnown RBP22.47■■□□□ 1.19
HDAC2-207ENST00000520170 TOB2Q14106 344 aaPredicted RBP22.47■■□□□ 1.19
HDAC2-207ENST00000520170 NOMO2Q5JPE7 1267 aa22.47■■□□□ 1.19
HDAC2-207ENST00000520170 PLA2G4FQ68DD2 849 aa22.47■■□□□ 1.19
HDAC2-207ENST00000520170 RUFY3Q7L099 469 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms