RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 HOXA2O43364 376 aa20.44■□□□□ 0.86
SREK1-207ENST00000520058 ERLIN2O94905 339 aa20.44■□□□□ 0.86
SREK1-207ENST00000520058 SKIP12755 728 aa20.44■□□□□ 0.86
SREK1-207ENST00000520058 IBSPP21815 317 aaPredicted RBP20.44■□□□□ 0.86
SREK1-207ENST00000520058 LONP1P36776 959 aaKnown RBP20.44■□□□□ 0.86
SREK1-207ENST00000520058 PPP2R5AQ15172 486 aa20.44■□□□□ 0.86
SREK1-207ENST00000520058 RTN4RL1Q86UN2 441 aaPredicted RBP20.44■□□□□ 0.86
SREK1-207ENST00000520058 ARNTL2Q8WYA1 636 aa20.44■□□□□ 0.86
SREK1-207ENST00000520058 ZNF396Q96N95 335 aaPredicted RBP20.44■□□□□ 0.86
SREK1-207ENST00000520058 BHMT2Q9H2M3 363 aa20.44■□□□□ 0.86
SREK1-207ENST00000520058 ELAC1Q9H777 363 aaKnown RBP20.44■□□□□ 0.86
SREK1-207ENST00000520058 COL4A6Q14031 1691 aa20.44■□□□□ 0.86
SREK1-207ENST00000520058 GTPBP6O43824 516 aaPredicted RBP20.43■□□□□ 0.86
SREK1-207ENST00000520058 EYA4O95677 639 aa20.43■□□□□ 0.86
SREK1-207ENST00000520058 ARL2P36404 184 aa20.43■□□□□ 0.86
SREK1-207ENST00000520058 BTG3Q14201 252 aaPredicted RBP20.43■□□□□ 0.86
SREK1-207ENST00000520058 IL17AQ16552 155 aa20.43■□□□□ 0.86
SREK1-207ENST00000520058 FAM102BQ5T8I3 360 aa20.43■□□□□ 0.86
SREK1-207ENST00000520058 SP7Q8TDD2 431 aaPredicted RBP20.43■□□□□ 0.86
SREK1-207ENST00000520058 LINC01599Q8WXQ3 324 aa20.43■□□□□ 0.86
SREK1-207ENST00000520058 MYLIPQ8WY64 445 aa20.43■□□□□ 0.86
SREK1-207ENST00000520058 POLR3FQ9H1D9 316 aaPredicted RBP20.43■□□□□ 0.86
SREK1-207ENST00000520058 PRDM12Q9H4Q4 367 aa20.43■□□□□ 0.86
SREK1-207ENST00000520058 XPNPEP1Q9NQW7 623 aa20.43■□□□□ 0.86
SREK1-207ENST00000520058 TMEM161AQ9NX61 479 aa20.43■□□□□ 0.86
SREK1-207ENST00000520058 A0A087WWV3 80 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 LCHNA4D1U4 455 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 LINC01553A4QN01 128 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 C9IYK1 514 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 DGKIO75912 1065 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 CYP11B2P19099 503 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 TXLNAP40222 546 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 TWF2Q6IBS0 349 aaKnown RBP20.42■□□□□ 0.86
SREK1-207ENST00000520058 MAEAQ7L5Y9 396 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 CABP7Q86V35 215 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 ZBTB8OSQ8IWT0 167 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 SPRYD3Q8NCJ5 442 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 IFT74Q96LB3 600 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 IFT122Q9HBG6 1241 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 KCNG1Q9UIX4 513 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 PIN4Q9Y237 131 aaKnown RBP20.42■□□□□ 0.86
SREK1-207ENST00000520058 ADGRA3Q8IWK6 1321 aa20.42■□□□□ 0.86
SREK1-207ENST00000520058 PP2D1A8MPX8 630 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 MGEA5O60502 916 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 IGFBP4P22692 258 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 CDC25AP30304 524 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 AXLP30530 894 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 RAB27AP51159 221 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 ERVK-21P61565 698 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 DSC3Q14574 896 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 CMTR2Q8IYT2 770 aaKnown RBP20.41■□□□□ 0.86
SREK1-207ENST00000520058 ABI1Q8IZP0 508 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 KIFAP3Q92845 792 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 NFKBIZQ9BYH8 718 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 C2orf40Q9H1Z8 148 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 CERS4Q9HA82 394 aa20.41■□□□□ 0.86
SREK1-207ENST00000520058 E9PMD0 336 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 INO80B-WBP1J3KQ70 363 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 CSDE1O75534 798 aaKnown RBP20.4■□□□□ 0.86
SREK1-207ENST00000520058 EOMESO95936 686 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 ZSCAN22P10073 491 aaPredicted RBP20.4■□□□□ 0.86
SREK1-207ENST00000520058 FGFR4P22455 802 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 PTENP60484 403 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 CEBPZQ03701 1054 aaKnown RBP20.4■□□□□ 0.86
SREK1-207ENST00000520058 STK38Q15208 465 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 HYIQ5T013 277 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 RSPH1Q8WYR4 309 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 TIPINQ9BVW5 301 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 KIAA1671Q9BY89 1806 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 KCND2Q9NZV8 630 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 DAXXQ9UER7 740 aaPredicted RBP20.4■□□□□ 0.86
SREK1-207ENST00000520058 CCDC39Q9UFE4 941 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 CLIC4Q9Y696 253 aa20.4■□□□□ 0.86
SREK1-207ENST00000520058 A0A0U1RQF3 1178 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 LRRIQ4A6NIV6 560 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 SSBP05455 408 aaKnown RBP eCLIP20.39■□□□□ 0.85
SREK1-207ENST00000520058 GLRA2P23416 452 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 FAM189BP81408 668 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 CAPSQ13938 189 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 ECM1Q16610 540 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 IFNLR1Q8IU57 520 aaPredicted RBP20.39■□□□□ 0.85
SREK1-207ENST00000520058 FBXO22Q8NEZ5 403 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 ASAP3Q8TDY4 903 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 ZNF689Q96CS4 500 aaPredicted RBP20.39■□□□□ 0.85
SREK1-207ENST00000520058 PGBD4Q96DM1 585 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 DRC1Q96MC2 740 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 MMTAG2Q9BU76 263 aaKnown RBP20.39■□□□□ 0.85
SREK1-207ENST00000520058 AGPAT5Q9NUQ2 364 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 MTUS1Q9ULD2 1270 aa20.39■□□□□ 0.85
SREK1-207ENST00000520058 COL4A4P53420 1690 aaPredicted RBP20.38■□□□□ 0.85
SREK1-207ENST00000520058 ATL3Q6DD88 541 aa20.38■□□□□ 0.85
SREK1-207ENST00000520058 FAM173BQ6P4H8 233 aa20.38■□□□□ 0.85
SREK1-207ENST00000520058 NOTUMQ6P988 496 aa20.38■□□□□ 0.85
SREK1-207ENST00000520058 RNF169Q8NCN4 708 aa20.38■□□□□ 0.85
SREK1-207ENST00000520058 CNNM3Q8NE01 707 aa20.38■□□□□ 0.85
SREK1-207ENST00000520058 DEPTORQ8TB45 409 aa20.38■□□□□ 0.85
SREK1-207ENST00000520058 TRAIPQ9BWF2 469 aa20.38■□□□□ 0.85
SREK1-207ENST00000520058 AAASQ9NRG9 546 aa20.38■□□□□ 0.85
SREK1-207ENST00000520058 SRPRBQ9Y5M8 271 aaKnown RBP20.38■□□□□ 0.85
SREK1-207ENST00000520058 PHLPP2Q6ZVD8 1323 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms